Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g02051 ATGGAGCTATGGAACAGAGCCCGAAGCTTTGCGGAGGAAGCAGCGAAACGATCCCAGGATCTGTCGTTGGGAGCTTCAGCTTCCAAATTTGCAGACATCATAACAGAGACCACCAAAGAGATCGCAGCACAAGCTTCCAAGCGTTTGCCCCAACATTATTTCAAAAACGACGTCGATCTCATCACTTTTGGCATCACCGAAGAGTTGAGGGAATTCGTCAGAGGGATCACCATCGCCACCTTTGAATATTTCCCCCTTCAAGATGATACGGATTTGTCTGATGTTCCTGCAGTTTCAAATATTAGGCAGGATCTAACCGAGTGGCAGCAAAAACATGCAAGCCTTGTTCTTTCTACAGTCAAGGAGATTTCAAGATTGAGGTATGATCTGTGTCCACGAGTCATGAAAGAGAGGAAGTTTTGGAGAATATATTTTATACTTGTGAATAATCATATTGCACCCTATGAAAATCGGTACATGGAAGAAGAAAAACTAAAATCATCTGAACAAGATCACAAAGTGATGATGAAATCCTTAAGCACTGAATTGAACTCTAATCAAGAGGTGCAGGAAGTGAAAAAAGAGACCAAATCTTCAAAACCATCAACTGAGCAAGACTTGGATGTATTTCTTCTGGGAGGAGACAGTGATGATGAGCCTGATGATGGGGATGGGGGATATGATGATGATTTGGACAAACTGATGGATAATTCGGACGATGAGAAAGGGAAATCATAG 738 0.4228 MELWNRARSFAEEAAKRSQDLSLGASASKFADIITETTKEIAAQASKRLPQHYFKNDVDLITFGITEELREFVRGITIATFEYFPLQDDTDLSDVPAVSNIRQDLTEWQQKHASLVLSTVKEISRLRYDLCPRVMKERKFWRIYFILVNNHIAPYENRYMEEEKLKSSEQDHKVMMKSLSTELNSNQEVQEVKKETKSSKPSTEQDLDVFLLGGDSDDEPDDGDGGYDDDLDKLMDNSDDEKGKS 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g02051 245 PANTHER BSD DOMAIN PROTEIN 1 49 - -
Cca11g02051 245 PANTHER BSD DOMAIN PROTEIN 56 241 - -
Cca11g02051 245 Gene3D BSD domain 80 163 IPR035925 -
Cca11g02051 245 Pfam BSD domain 107 152 IPR005607 -
Cca11g02051 245 PANTHER BSD DOMAIN-CONTAINING PROTEIN 1 49 - -
Cca11g02051 245 PANTHER BSD DOMAIN-CONTAINING PROTEIN 56 241 - -
Cca11g02051 245 MobiDBLite consensus disorder prediction 188 202 - -
Cca11g02051 245 MobiDBLite consensus disorder prediction 211 229 - -
Cca11g02051 245 ProSiteProfiles BSD domain profile. 107 152 IPR005607 -
Cca11g02051 245 MobiDBLite consensus disorder prediction 230 245 - -
Cca11g02051 245 SMART wurzfinal6 100 152 IPR005607 -
Cca11g02051 245 SUPERFAMILY BSD domain-like 64 157 IPR035925 -
Cca11g02051 245 MobiDBLite consensus disorder prediction 180 245 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g02051 Cca-Chr11 46069128 46075367 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca11g02051 3 220 EF-hand Containing Proteins AT1G69030 39.519 1.94e-62 196
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g02051 - - gmx:100527562 357.836
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca11g02051 11 46069128 46075367 Cca11g02051 11 46069128 46075367 ECH