Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g02049 ATGCAGCATTTCGTGGATTTGCAAGAGAATTCGGAGTTGGGTGAGGCGAATTCATGGCTTTCAGCGAAAGAGCAATCCGGTGCGGCACCGAATACCAATTTGGATCGCGTCCTCTTCAACGACCTCGTCGAGATTGTCCCTCTAGTTCAGTCCCTCATCGATCGTAAAGCAAGCCGTTCATTCACGCGGCGTGGTTCCATGATCTACACCAAGACGCCTACAAGAGAAACATTGTCCAAAAGAGCAGCAGATTCAAAAAGTAGGAATGTTGCCCAATCTATTCCTGCCAAAAAGAAAAGGGACCATGGAGAAAAAGAACAAGGAAAAAATGGCAGCAATGATGCTGATAGCTATTCCGTGTTATCTTCAAGATCTTTGGCTTCAGAAAGGGACAGCGAGGAAATGGGTATGTTGAAGGAGCAAGTAGAGGAACTTCAGAGGAAATTGTTGGAGAAAGATGAACTTTTAAAGTCAGCAGAAAACTCAAGAGACCAGATGAATGCTTTTAATGCAAAACTTGATGAACTGAAACACCAGACTTCCGAAAAGGACACTTTACTGAAGTATACTCAACAGCAGCTCTCTGATGCTAAGATTAAGCTTGCAGACAAGCAAGCTGCTCTTGAAAAGATACAATGGGAAGCAATGACATCCAACAAGAAAGTAGATAAACTCCAAGATGAGCTAGATTCTATGCAAGCAGATATTTCATCATTTACGTTATTACTGGAAGGACTGACAAAAACTGACACTGCTAAATACACCGATGATTATGACATCAAGCCTTATGATTTCACTCAACTGCCTAGTATTGATGATTTGGATGAGATAGAATTGCAGAAAATGGAAGAAGCAAGAAAAGCTTATATGGCTGCTGTTAATATCACGAAAGAAAAACGAGACGAGGAATCTATTGCTGCTGCTGCCAATGCTAGGTTACATCTTCAGTCACTTGTTTTCAAATCCAAAAATTTTAACCTGTGA 984 0.4126 MQHFVDLQENSELGEANSWLSAKEQSGAAPNTNLDRVLFNDLVEIVPLVQSLIDRKASRSFTRRGSMIYTKTPTRETLSKRAADSKSRNVAQSIPAKKKRDHGEKEQGKNGSNDADSYSVLSSRSLASERDSEEMGMLKEQVEELQRKLLEKDELLKSAENSRDQMNAFNAKLDELKHQTSEKDTLLKYTQQQLSDAKIKLADKQAALEKIQWEAMTSNKKVDKLQDELDSMQADISSFTLLLEGLTKTDTAKYTDDYDIKPYDFTQLPSIDDLDEIELQKMEEARKAYMAAVNITKEKRDEESIAAAANARLHLQSLVFKSKNFNL 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g02049 327 Coils Coil 128 179 - -
Cca11g02049 327 MobiDBLite consensus disorder prediction 94 111 - -
Cca11g02049 327 PANTHER PROTEIN MICROTUBULE BINDING PROTEIN 2C 1 321 IPR040289 GO:0008017|GO:0010497
Cca11g02049 327 MobiDBLite consensus disorder prediction 112 126 - -
Cca11g02049 327 MobiDBLite consensus disorder prediction 66 138 - -
Cca11g02049 327 PANTHER PROTEIN MICROTUBULE BINDING PROTEIN 2C 1 321 - -
Cca11g02049 327 Coils Coil 279 299 - -
Cca11g02049 327 Coils Coil 194 242 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g02049 - - gmx:100799930 568.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca11g02049 11 46036685 46040674 Cca11g02049 11 46036685 46040674 ECH