Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g02045 ATGGGAAGGGCACGTATGAGGTTGTGCTTTGGTCACGCCACGCCTCGTGTTCGAGCCTTTTCTGCATCCAAGTCTCCTTCCTCCTCTGCTTCTATCAAATATGCAAAAAGAACTGAGTTTTCAAGCAACACAAACCACGACCCTGCCAATAAGATAATGGTGGTTGTTGATTCTAGCTTTGAGGCTAAGGGGGCTCTTGAATGGGCTCTCTCTCACACCGTTCAGACTCGGGACACTCTTGTTCTTCTTCATGTATCCAACCCCACTAGAGAAGGTACGGAATGTGGTGCGAAGTTTAATGTGAAGGCTTATCAAGTTCTCCTTGACATGAAAAGCATGTGCGAAACGAAGAGACCCGGGGTGCAAGTGAATGTGGTGATGGTTGAAGGAGAGGAGAAGGGTGTTGCAATAGTGGAAGAGGCAAAGCAACAGAGGGTGTCACTGTTGGTAGTGGGACAAAGAAAACGATCCATGTTGCGGTGCATCGTGAGGAGGTGGCTACGAAAGAAAACAAGACCTGGGGTTGTTGACTATTGTATACAAAACTCGCCTTGCATCACCATTGCAGTCAGGAAGAAGAATAAGAAACATGGAGGCTATTTGATTACTACTAAACGCCATAAAAAGTTTTGGCTTTTGGCTTGA 645 0.4636 MGRARMRLCFGHATPRVRAFSASKSPSSSASIKYAKRTEFSSNTNHDPANKIMVVVDSSFEAKGALEWALSHTVQTRDTLVLLHVSNPTREGTECGAKFNVKAYQVLLDMKSMCETKRPGVQVNVVMVEGEEKGVAIVEEAKQQRVSLLVVGQRKRSMLRCIVRRWLRKKTRPGVVDYCIQNSPCITIAVRKKNKKHGGYLITTKRHKKFWLLA 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g02045 214 Pfam Universal stress protein family 50 191 IPR006016 -
Cca11g02045 214 Gene3D HUPs 49 200 IPR014729 -
Cca11g02045 214 CDD USP_Like 51 190 - -
Cca11g02045 214 PANTHER ADENINE NUCLEOTIDE ALPHA HYDROLASES-LIKE SUPERFAMILY PROTEIN 1 214 - -
Cca11g02045 214 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 50 194 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g02045 Cca-Chr11 46018080 46019270 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g02045 - - ccaj:109809391 417.157
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca11g02045 11 46018080 46019270 Cca11g02045 11 46018080 46019270 ECH