Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g02003 ATGCCTGGAAACGAAGTAGGAGACAGGGTCCATAATTTTTTTGGTCAAGAGAACTTGTCCCAGGGCCAATATCATTCACAGGCAGGTGACGGGAACTGGCCAGGTATAAGCAACAATTTGTGGGCTGGTAGCCAGAGACCAACTGGTGCACCCTTTATTTCCAATTTGAAGAATTTTAATCAACAGCAGTCAGATTTTGAGCAGGGACACACAAGCTCTCCACATTTGCGTCATGGTTTGAACCTGGCACAATCAAATTTGAGGCCTGACTCTGGCAGAAATCAACTCCCAAACCAACAGACAGCTGTAAATGGCTATATGTCAGGACATCAGGTTTTTCAGTCCAGGCAAAATGAAGCCAACATTTTGGGAATGGATACCGAAACTGATTTGCATGGCATATCAAGTCTGTCAAGAGGAATATCAGTACTAGAGTCACAACAAGGGGCTGGTCTTGAACACTATAAGAAAAATTTGACTAGGACTGATGCATCTGAGTCTCCTGTCAATTATGATTTTTTTGGAAGTCAACAGCAAATGAGTGGTCGCCATTCAGGCATGCTTCAGTCTTTTTCTAGACAGCAGTCAGGGATGAATGACATGCAGCTTTTACAACAGCAAGCAATGCTAAATCAGATGCAAGAACTTCAAAGGCAGCAACAATTTCATCAACTAGAAGCTAGGCAACAGAGTTCTATGAATCCAGCCTCCTCCATTTCAAAACAGACAGTTGCAAGCCAATCTGCATCTCTTATTAACGGCATTCCCATCAATGAGGCATCTAACCTTGTGTGGCAGCAGCCTGAACTTATGGCAAATAATGCAAATTGGCTCCAGCATGGTGCATCTCCAGTTATGCAAGGGTCCTCTAATGGACTGGTGTTACCTCCTGAACAACTGCGCCTTATGGGTTTGGTTTCTAATCAGGGAGACCAGTCTCTGTATGGGCTTCCAATTTCTGGCTCAAGAGGTACACCTAACCTGTATTCTCACATTCAAGCAGATAAGCCTGCAATGTCTCAGGTTTCTGTCCAACATCAACATCAGTATTCTCGCATTCAAGGCGACAAGTCAACATTGCCACACATATCAGCAAGTGGTCATTCATTTCCAGTTCATCAGTATGCTTCAATTTCGGATCAAACTAACATGAATGATGGAACTTCAGTTTCAAGACAGGAAATTCAAGGAAAAAATATGTTTGGTTCTCTCGCTCAAGGTATAAACAGTGGTCTAAATATGGAGAACATGCAGCCAGTGAATTCTGAGCAACGAGATGTACCAATTGAAGATTTTAATGGAAGGCAAGAACTAGCTGGATCTTCTGACACTTCACAGGACAAGGTGGTAGGTCAGGTTGCTCCTTCACAGAATGCAGTGACCCTAGATCCAACAGAAGAGAAGATTTTATTTGGTTCAGATGACAGCCTTTGGGGTGGATTTGGTTGGAATAGTGGTTTAAATATGCTGGATGGTGCGGATAGTTTTGGTGGAGTTCAATCAGTTCAGAGTGGGAGTTGGAGTGCACTTATGCAGTCTGCTGTAGCTGAAACTTCTAGTAGTGAAATGGGTATACAGGAAGAATGGAGTGGTCTTAGTGTCCGGAATACTGAACGTTCATCTGGAAGTGAGCGGCCTTCAACCATTGATAGCAGCAAACAACAATCAGTTTGGACTGACAATAACTTGCAGTCAGCACCTAATATAAATTCAAGGCCTTTTCTTCGGCCAGATGATCTCAGCAGGCCCAGTACCACTGTAAACTATTCTGGTATTCCTGGATTTCATCAATCAGGTGCTGATACCGCACAGGAACATCAAGACAGGTTACAGACTGATTCTTCCCAAAGATCAATTCCACAGTTTTTAGAAAGAGGCAAATGGTTGGATTGCAGCCCTCAGCAAAAACCAATTGCAGAAGGGAATCATGTTTATGGAAATGCTGCTAATACCTCAAGTTTGGAACTAAATGAGAAGGTTATTTCAGGTTCTTGGACCCATCAACAGATGCTTTCATCCCCTAATAGTAGGGGGGAGCAATTCAATAGATCTAATGGATGGAATGCTATTAAATCACCAACACCCAATAACAATTCTAATATTAAAATCCGTGAAAAAGAAAATGTGTTGCAGCCTCATCATGATAAAGCTATGCAAGAGGATATGGGCCAGGTTCCTAAAATGTGGGAGCCCGATTCTGATACTAATTCCTCTGTTGGGTTGGAACATGCAAAGTCTCCAGGTAATATGCAGGTTTGTGGGGAGGATTCTGGTATGAATGGAATTGCTGCCATACCAAATTCAGGTGCTACATGGGTCAGCAGGCAAAGCAACCAGCAGCTCCCTAATGTTGATGCATGGAGACATACAGATTCTGTGGGGAGCTATAGAAGAAATGAAGGTGCAGGAAAATATAGGCATCATATGGAGAAAAATCCTTTAGTTTTGGAATCATTGAAGAATGAAAAGTCAGAAGGAGAGGCACATGATATGGAAAACTCTAACAAAAAGGATAAATCAGTAGATGGTCTTGCCTTTAATTCTTCCCATCACAGAACTGGTAGTTTGAGAGAAAATCCCAGTTTTGACGGTGATTTGCATAGTCCAAAGTTATCTGGGCAGGGAAATCGAAGACCTCCTATAACTCGTAAATTTCAGTATCACCCAATGGGGGATGTTGGTGGTGCTGACATAGAACCTTATGGAAACAAACATGTCATAAATTCACAGCCCATGCCTCATCAACCCATTGGAGGACTTAAAGGGCAGGACCAAAGCTATCCTGGGCAATCAAAATACAGTCATTCTGATGGGAATTATAATGAAATGGAGAAGGGTGACTCAAAAACCATAGATGATAATGCTTCAAAAAGCATGCTGCCTGGCCATATACCCAAAACATTGACTCCATTTGATAGAACTGTTGGAAATTATGCCTTGAACAATACTGCTTCGCCCAGTCAAAATATTCTTGAGCTTCTTCATAAAGTGGATCAGTCAAGGGAGCATGGCATTGCAACAAACACAAGCACTTCTAACCGCCCTTTATCTTCCAGGGTGATGGATACTGAATCTTCTGATGGATCTGTTGTACATCCTCAACGAAATCAAAGTTCCTTGTCTCAGGGCTTTGGTTTACAATTGGCTCCTCCTACCCAAAGGCTTCCTCTGGCATCCTCTCATGCTACACCCCATGTTGCATCTGAGACAGGGGATAAGGGTCATACTTGGTTGGCTGCTACTCAGACTTTTCCTTCTCGAGAATCATCTCATGAGCTTAGAAGTAACATTTCCAGTTCCTCTGGACAACTATTTGACAAAGCCTCACAGTACAGTGCACTGGGAAATATTCCTCAGACTTTCACATCAGGCTTTCCTTTTTCAAGAATCCATACTCAGAATCAGAATGTGGCTAGTCTTGGTGGACAACTAGCAAATACCCAATGTGATAGTGCAACTTTTGTTGACCGGACTGCTTCCACTAGTCAGGTAGATGAATATTGTGAAAGAGCTCAAACTAGTCAATCTGAATTGCAATCTGCTCCGGACATGTCCCAGATGGTGGATGGTATGAACCAAATCCATGCTGGTGATCCTACCATGAAATTTTCGGCATTGGAGGCTGGCACAGCTTCTCATCCTTCTGTTACAGCATCTCTACAGGGTGCCCCTTCAAAAATTCTACACAATGTATGGACAAGTGTTTCTAACAAGCAATATCCTAATGCTTTGAAGATTTCACCCCATCCTCAACAAATTAATATTTGTGAAACTACAACAGGACCACAGAAGCCAAGTATTGAAGATTCAGAGAAAGATGGTAACCTTTCTGGGCAGCAGGTATTGCAAGTGAGTGTTGATACTGTTGAAGAGATTGCAAGTGCTTCACATGTGAAATATACCCCTGATGCATCTCAATCAAGCCCAGCTGCTACCTCTAAAGATATTGAAGATTTTGGCCGGTTTTTAAGACCAAACAATATTTTGCATCAGAATTTCTCTATGCTAAATCAAGTCCAGTCCATGAAAAATATGGAGATTGATCCTAGTAATCGAGATGTCAAGAGATTCAAGGTTTCAGATAATGTGATGGACAAACAACAGGTAGATTCCAACCATGGGCAACAGTCATATGGATACAATAACATAGTCAAAGATTTGTCAGGTAATAGTTCTCCAGTGCCACCATCAGATCCGAACTTGCTAAGCTTTTCAACAAAGCCAGGTGATGCCCAAGACACTAATGCATCTTCTCAGGAGATGGTTGGATATGGTCAGAGGAATGCTCTTAATGTTGCTAATAATAACAAATTAACTTCTGTTAAAAGTGAGCATTCTATGATAAATCCTCAGATGGCTCCATCATGGTTTGATAAGTATGGAGCTTTTAAAAATGGTAAGACGTTGCAAATGCACGATGTACGAACAATGACTCCTCACAAAGTTATGGAGCAGCCTTTAATAAGGAATCAATCTGGTAGTTTGCATATTGCTAATTCAGTGGAGCAAGTTAATAGTCTCAGTGTTGCTGGTCAGCTTGGTAATGGTGGGCAAAACCCAATGCTCACTTCAGCTGGAAGTGAGCATCTTCCTTCTCAGTTATTGCTTCCTCCAGCTGTTGAACCTGATCTGTCTAGTATGCGACCAAAGAAGCGTAAAGATTCCACATCTGAACTCATACCATGGCATAAAGAGATGAGTCTGGGCTCTGAAAGGCTTCAAGATATCAGTGCGGCAGAATTTGAGTGGGCCCAAGCTGCAAATAGATTGATTGAGAAGGTTGAGGATGATGTTGAGCTAGTCGAAGATTTGCCAATGATGAAGTCAAAAAGAAGACTTGTGTTAACATCTCAGCTTATGCAGCAGCTACTTAATGCCCCTCCAGCTGCAGTTCTCTCTTCAGATGCCAAGTCGCATCATGAAAGTGTGGTCTACTCTGTTGCTAGATTAGTGTTGGGAGATGCATGCAGTTTGGTCTCATGGTCTGGAAATGACACACTGATGTCCTCTGGCAGCAAAAAACTCCTGCCTGATAAGCTCAAATCATCTGAGAAAATTGATCAGTGCATTTTGAACGTGGAAAACTTTGTTGGTAGAGCGAGGAAACTGGAAAATGACATATTGAGATTGGATAGTAGAGCCTCAATTTTGGACTTGAGAGTGGAATGTCAAGATTTAGAAAGATTTTCCGTCATCAATCGATTTGCCAAGTTTCATGGTCGGGGGCAAAATGATGGGGCAGAAACCTCATCCTCTGATGCAACTGCAAATGCTCAGAAATCATGCCCCCAGAAATATGTTACTGCAGTTCCAATGCCTAGAAACCTACCAGACAGGGTACAATGTCTTTCACTTTGA 5358 0.4224 MPGNEVGDRVHNFFGQENLSQGQYHSQAGDGNWPGISNNLWAGSQRPTGAPFISNLKNFNQQQSDFEQGHTSSPHLRHGLNLAQSNLRPDSGRNQLPNQQTAVNGYMSGHQVFQSRQNEANILGMDTETDLHGISSLSRGISVLESQQGAGLEHYKKNLTRTDASESPVNYDFFGSQQQMSGRHSGMLQSFSRQQSGMNDMQLLQQQAMLNQMQELQRQQQFHQLEARQQSSMNPASSISKQTVASQSASLINGIPINEASNLVWQQPELMANNANWLQHGASPVMQGSSNGLVLPPEQLRLMGLVSNQGDQSLYGLPISGSRGTPNLYSHIQADKPAMSQVSVQHQHQYSRIQGDKSTLPHISASGHSFPVHQYASISDQTNMNDGTSVSRQEIQGKNMFGSLAQGINSGLNMENMQPVNSEQRDVPIEDFNGRQELAGSSDTSQDKVVGQVAPSQNAVTLDPTEEKILFGSDDSLWGGFGWNSGLNMLDGADSFGGVQSVQSGSWSALMQSAVAETSSSEMGIQEEWSGLSVRNTERSSGSERPSTIDSSKQQSVWTDNNLQSAPNINSRPFLRPDDLSRPSTTVNYSGIPGFHQSGADTAQEHQDRLQTDSSQRSIPQFLERGKWLDCSPQQKPIAEGNHVYGNAANTSSLELNEKVISGSWTHQQMLSSPNSRGEQFNRSNGWNAIKSPTPNNNSNIKIREKENVLQPHHDKAMQEDMGQVPKMWEPDSDTNSSVGLEHAKSPGNMQVCGEDSGMNGIAAIPNSGATWVSRQSNQQLPNVDAWRHTDSVGSYRRNEGAGKYRHHMEKNPLVLESLKNEKSEGEAHDMENSNKKDKSVDGLAFNSSHHRTGSLRENPSFDGDLHSPKLSGQGNRRPPITRKFQYHPMGDVGGADIEPYGNKHVINSQPMPHQPIGGLKGQDQSYPGQSKYSHSDGNYNEMEKGDSKTIDDNASKSMLPGHIPKTLTPFDRTVGNYALNNTASPSQNILELLHKVDQSREHGIATNTSTSNRPLSSRVMDTESSDGSVVHPQRNQSSLSQGFGLQLAPPTQRLPLASSHATPHVASETGDKGHTWLAATQTFPSRESSHELRSNISSSSGQLFDKASQYSALGNIPQTFTSGFPFSRIHTQNQNVASLGGQLANTQCDSATFVDRTASTSQVDEYCERAQTSQSELQSAPDMSQMVDGMNQIHAGDPTMKFSALEAGTASHPSVTASLQGAPSKILHNVWTSVSNKQYPNALKISPHPQQINICETTTGPQKPSIEDSEKDGNLSGQQVLQVSVDTVEEIASASHVKYTPDASQSSPAATSKDIEDFGRFLRPNNILHQNFSMLNQVQSMKNMEIDPSNRDVKRFKVSDNVMDKQQVDSNHGQQSYGYNNIVKDLSGNSSPVPPSDPNLLSFSTKPGDAQDTNASSQEMVGYGQRNALNVANNNKLTSVKSEHSMINPQMAPSWFDKYGAFKNGKTLQMHDVRTMTPHKVMEQPLIRNQSGSLHIANSVEQVNSLSVAGQLGNGGQNPMLTSAGSEHLPSQLLLPPAVEPDLSSMRPKKRKDSTSELIPWHKEMSLGSERLQDISAAEFEWAQAANRLIEKVEDDVELVEDLPMMKSKRRLVLTSQLMQQLLNAPPAAVLSSDAKSHHESVVYSVARLVLGDACSLVSWSGNDTLMSSGSKKLLPDKLKSSEKIDQCILNVENFVGRARKLENDILRLDSRASILDLRVECQDLERFSVINRFAKFHGRGQNDGAETSSSDATANAQKSCPQKYVTAVPMPRNLPDRVQCLSL 1785
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g02003 1785 MobiDBLite consensus disorder prediction 518 615 - -
Cca11g02003 1785 MobiDBLite consensus disorder prediction 823 949 - -
Cca11g02003 1785 MobiDBLite consensus disorder prediction 666 701 - -
Cca11g02003 1785 Coils Coil 206 226 - -
Cca11g02003 1785 MobiDBLite consensus disorder prediction 22 44 - -
Cca11g02003 1785 MobiDBLite consensus disorder prediction 1003 1047 - -
Cca11g02003 1785 MobiDBLite consensus disorder prediction 518 571 - -
Cca11g02003 1785 MobiDBLite consensus disorder prediction 1258 1277 - -
Cca11g02003 1785 PANTHER DENTIN SIALOPHOSPHOPROTEIN-LIKE PROTEIN 1012 1785 - -
Cca11g02003 1785 PANTHER DENTIN SIALOPHOSPHOPROTEIN-LIKE PROTEIN 1 987 - -
Cca11g02003 1785 MobiDBLite consensus disorder prediction 1367 1416 - -
Cca11g02003 1785 Coils Coil 1584 1604 - -
Cca11g02003 1785 MobiDBLite consensus disorder prediction 1539 1558 - -
Cca11g02003 1785 PANTHER SIALOPHOSPHOPROTEIN-LIKE PROTEIN, PUTATIVE-RELATED 1012 1785 - -
Cca11g02003 1785 PANTHER SIALOPHOSPHOPROTEIN-LIKE PROTEIN, PUTATIVE-RELATED 1 987 - -
Cca11g02003 1785 MobiDBLite consensus disorder prediction 581 601 - -
Cca11g02003 1785 MobiDBLite consensus disorder prediction 823 845 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g02003 Cca-Chr11 45457349 45464972 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g02003 - - ccaj:109809249 3518.01
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca11g02003 11 45457349 45464972 Cca11g02003 11 45457349 45464972 ECH