Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g02000 ATGGACGATGACAGAGATTTCGAGTTGTTATTTCACAGTTGGAATACCAAGAATCCGACTGATCGACTTTTTATTATCTCTTGTTTTGTTGCTGCTCTTGTTGGAATTTTGACCATAGCCTACACGGCCTTTCAATGGAGGAGAAATATCAATCTAAGTTGGATGAAAGCCATAGCCAGGTCTAAGAAAAACCCAAAAGCAAGGCATAAAATTCCTGTGGCCCCTCATACATGGGTTCTAGAAACTGTATCTCGTGCCAAGAATTTAAACTGTTGTGTTTGCTTTAAATCCATGTCGCCCTCTCAAGCTCTAGGGCCTATAGTAGCTTCTGAAAGTTTCATCCACCGTTGCTGTTTTTGTGGTGCAGTAGCTCATCTTAGCTGTTCATCTAGTGCCCACAAGGACTGCAAGTGTGTTTCTATGATTGGATATGAGCATGTCATGCACCAATGGGCTGTTCGTTGGACAGATGTAGCTGACCAACCTGATGAAAGTGCTCTCTGTAGTTACTGTGAAGAGCCATGTGGTGGGTCGTTCCTCAGTGGTTCCCCTATATGGTCTTGCTTGTGGTGCCAGCGTTTAGTACACGTTGATTGTCATGGTACAATGTCTAGTGAAACGGGTGATATTTGCGATCTGGGCCAATTTAAAAGATTGATACTATCACCATTGTATGTAAAAGAATTGAACTGGAACATGCCAGGTGGATTTTTGAGCTCAATTACTCATGGGGCAAATGAGATAGCATCTTCAGTTCGGGCAAGTATTAGGAACCAGAGCAAAAAATATAAGCATGGAAATGAACCATCTGTTGAATCTGGGAATAGTGAGAGCATTGGTGAAATGTCCACAGAAAGCACCGGTAATTCTCATCAAATAGATAATGGTCATCATGAAGTGGATGAAAAAAATAGCACGAATAAGGAGATTCGACACCAAGATAGTGAAGTAGATAAGAAGATGGATAGAAAACCCAGTCTTGGACGCAATTCATCAATCAATCAGAAGGATGAGTCCCATGCATTAGGAGTAAAGCAGAAATATGATTTGATTGATTTGCCTCCAGATGCAAGACCATTATTAGTTTTTATAAACAAGAAGAGTGGTGCCCAGCGTGGAGACTCACTTAGAATGCGTCTGAATATCCTTTTAAATCCTGTTCAGGTGTTTGAATTGAGCTCAACGCAGGGGCCAGAGATGGGACTTTATTTGTTTAGAAAGGTGCCTCACTTCAGAATTCTTGTATGTGGGGGAGATGGTACCGTTGGTTGGGTTCTGAATGCAATAGACAAGCAAAATTTTGTTTCCCCTCCCCCTGTTGCTATTCTTCCTGCTGGTACAGGAAATGATCTCGCTAGAGTTCTCTCCTGGGGAGGTGGCTTGGGTCCAGTAGAGAGGCAAGGGGGTCTTAGTACATTTTTGCATCACATAGAACATGCTGCTGTTACTGTTCTTGATCGGTGGAAAGTAACAATTAGTAATCCACAAGGAAAGCAACAGCTGCAACCAACAAAGTTTATGAACAATTATCTTGGAATTGGATGTGATGCAAAGGTTGCTTTGGACATTCATAATCTGCGGGAAGAGAATCCTGATAAGTTTTATAATCAGTTTATGAATAAAGTTCTATATGCAAGAGAAGGTGCTAAAAGTATTATGGACAGGACATTCGCCGATTTACCTTGGCAGATTCGAGTGGAGGTGGATGGAGTTGAAATTGAGGTCCCTGAGGATGCAGAAGGTGTACTTGTTGCAAACATTGGAAGCTACATGGGAGGTGTAGATTTGTGGCAAAACGAGGATGAAAATTACGATAATTTTGATCAACAATCCATGCATGATAAGATACTTGAAGTTGTGAGCATATCTGGAACATGGCACCTCGGGAAGCTTCAGGTTGGGCTTTCTCGAGCTCGAAGACTTGCGCAAGGACAGTCAATTAAGATACAATTGTTTGCAATGTTTCCTGTACAAATCGATGGAGAGCCTTGGTTTCAGAAACCTTGCACAATTTCCATAACCCATCATAACCAGGTTATCATTCTAAAACTCCTCCACTGTGCATTTATAGGCAGCATCCCTTTTGTGTTAACTATCACTTGCCTTGCTGTTTGA 2115 0.4175 MDDDRDFELLFHSWNTKNPTDRLFIISCFVAALVGILTIAYTAFQWRRNINLSWMKAIARSKKNPKARHKIPVAPHTWVLETVSRAKNLNCCVCFKSMSPSQALGPIVASESFIHRCCFCGAVAHLSCSSSAHKDCKCVSMIGYEHVMHQWAVRWTDVADQPDESALCSYCEEPCGGSFLSGSPIWSCLWCQRLVHVDCHGTMSSETGDICDLGQFKRLILSPLYVKELNWNMPGGFLSSITHGANEIASSVRASIRNQSKKYKHGNEPSVESGNSESIGEMSTESTGNSHQIDNGHHEVDEKNSTNKEIRHQDSEVDKKMDRKPSLGRNSSINQKDESHALGVKQKYDLIDLPPDARPLLVFINKKSGAQRGDSLRMRLNILLNPVQVFELSSTQGPEMGLYLFRKVPHFRILVCGGDGTVGWVLNAIDKQNFVSPPPVAILPAGTGNDLARVLSWGGGLGPVERQGGLSTFLHHIEHAAVTVLDRWKVTISNPQGKQQLQPTKFMNNYLGIGCDAKVALDIHNLREENPDKFYNQFMNKVLYAREGAKSIMDRTFADLPWQIRVEVDGVEIEVPEDAEGVLVANIGSYMGGVDLWQNEDENYDNFDQQSMHDKILEVVSISGTWHLGKLQVGLSRARRLAQGQSIKIQLFAMFPVQIDGEPWFQKPCTISITHHNQVIILKLLHCAFIGSIPFVLTITCLAV 704
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g02000 704 SUPERFAMILY NAD kinase/diacylglycerol kinase-like 358 679 IPR016064 -
Cca11g02000 704 PANTHER DIACYLGLYCEROL KINASE 17 683 - -
Cca11g02000 704 Gene3D - 504 674 - -
Cca11g02000 704 Pfam Phorbol esters/diacylglycerol binding domain (C1 domain) 149 209 IPR002219 -
Cca11g02000 704 Pfam Diacylglycerol kinase catalytic domain 359 459 IPR001206 GO:0016301
Cca11g02000 704 SMART dagk_c4a_7 359 488 IPR001206 GO:0016301
Cca11g02000 704 SUPERFAMILY Cysteine-rich domain 144 212 IPR046349 -
Cca11g02000 704 Gene3D - 147 207 - -
Cca11g02000 704 MobiDBLite consensus disorder prediction 259 339 - -
Cca11g02000 704 SMART dagk_c4b_2 506 663 IPR000756 GO:0004143|GO:0007205
Cca11g02000 704 Gene3D - 356 487 IPR017438 -
Cca11g02000 704 MobiDBLite consensus disorder prediction 292 326 - -
Cca11g02000 704 Pfam Diacylglycerol kinase accessory domain 507 663 IPR000756 GO:0004143|GO:0007205
Cca11g02000 704 PANTHER DIACYLGLYCEROL KINASE 17 683 IPR037607 GO:0004143|GO:0007165
Cca11g02000 704 MobiDBLite consensus disorder prediction 269 291 - -
Cca11g02000 704 ProSiteProfiles Zinc finger phorbol-ester/DAG-type profile. 75 136 IPR002219 -
Cca11g02000 704 ProSiteProfiles DAG-kinase catalytic (DAGKc) domain profile. 355 494 IPR001206 GO:0016301
Cca11g02000 704 SMART c1_12 76 136 IPR002219 -
Cca11g02000 704 SMART c1_12 149 211 IPR002219 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g02000 Cca-Chr11 45423572 45431849 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca11g02000 1 683 Acyl Lipid Metabolism Gene Families AT5G07920 74.165 0.0 1063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g02000 K00901 - gmx:100794891 1332.78
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca11g02000 11 45423572 45431849 Cca11g02000 11 45423572 45431849 ECH