Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g01989 ATGGAGTACTCTAGTGGATTTCCTAGAAAAAGAGATGTTTCTCTTCATGAACTTAGCAGAAGGCTTGCTGAGTTTGCTGAAGTAAGAGGATGGGATCAATATCACAGTCCCAGAAATCTTCTTTTAGCTCTTGTGGGAGAGGTGGGGGAGTTGTCTGAGATATTCCAGTGGAAAGGAGAGGTTGCAAAGGGATTGCCAAATTGGAGTTCTGATGATAAGGAGCACTTGGAGGAAGAGCTTTCAGATGTTTTGCTGTATCTAGTGCGTCTTGCTGATGTTTGTGGGCTAGATCTTGGACAAGCAGCTCTAACAAAAATAGTAAAGAATGCTAAGAAATACCCAGTTACTAATGATCACACGCCCACTTCCACCTAG 375 0.4293 MEYSSGFPRKRDVSLHELSRRLAEFAEVRGWDQYHSPRNLLLALVGEVGELSEIFQWKGEVAKGLPNWSSDDKEHLEEELSDVLLYLVRLADVCGLDLGQAALTKIVKNAKKYPVTNDHTPTST 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g01989 124 PANTHER - 1 119 - -
Cca11g01989 124 Pfam MazG-like family 47 119 IPR025984 GO:0009143|GO:0047429
Cca11g01989 124 SUPERFAMILY all-alpha NTP pyrophosphatases 13 117 - -
Cca11g01989 124 PANTHER DCTP PYROPHOSPHATASE 1 1 119 - -
Cca11g01989 124 CDD NTP-PPase_RS21-C6_like 20 109 IPR025984 GO:0009143|GO:0047429
Cca11g01989 124 PIRSF UCP029826_pph 7 123 IPR025984 GO:0009143|GO:0047429
Cca11g01989 124 Gene3D - 7 119 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g01989 Cca-Chr11 45313703 45314584 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g01989 K16904 - gmx:100500294 223.787
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca11g01989 11 45313703 45314584 Cca11g01989 11 45313703 45314584 ECH