Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g01986 ATGGATAAAGCTCTGACTAAACTGGGAAGCTCTTGGATCTCAACCAAAGCCAAGACAGAGATTTCCCACATAACCGATGACCTATCATCTCTCTCAAATACGGTGGAAGAGAAGGCAAAACTTTTCATCAACAAGCTGAAAGGTAAATCTCAGAAAGGCTTACCAGATCTCCTTAGAGAGTACAACCTTCCTCCGGGTCTGTTTCCTCGGAACATAACATGCTACGAGTTTGATGCATCAAAAGGAAAGTTGATAGTGTACTTGTCCTCTCCCTGTGAAGTGTGTTTCAAGGACTCATCCATTGTGAGGTATGCAAATCGTGTAAAAGGGACACTGTCAAAGGGGAAGCTAACTGTCGTGGATGGAATGAAGAGCAAGGTTCTGGTGTGGGTCAAGGTCACTACTGTTGCTGTTGAGAGTTACAAGTCTGACAAAGTATGGTTCACTACCACCGCTGGAGTTAAGAAATCAAGGCCCAAAGATGCCTATCTTATGCCTCGTGAAGCTGTTAAGGTAGAAGAATTTTGA 528 0.4375 MDKALTKLGSSWISTKAKTEISHITDDLSSLSNTVEEKAKLFINKLKGKSQKGLPDLLREYNLPPGLFPRNITCYEFDASKGKLIVYLSSPCEVCFKDSSIVRYANRVKGTLSKGKLTVVDGMKSKVLVWVKVTTVAVESYKSDKVWFTTTAGVKKSRPKDAYLMPREAVKVEEF 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g01986 175 PANTHER T31J12.3 PROTEIN-RELATED 3 175 IPR007493 -
Cca11g01986 175 Gene3D - 32 175 IPR036758 -
Cca11g01986 175 Pfam Protein of unknown function, DUF538 56 163 IPR007493 -
Cca11g01986 175 PANTHER DUF538 FAMILY PROTEIN 3 175 - -
Cca11g01986 175 SUPERFAMILY At5g01610-like 3 174 IPR036758 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g01986 Cca-Chr11 45282025 45284204 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g01986 - - gmx:100776470 309.301
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca11g01986 11 45282025 45284204 Cca11g01986 11 45282025 45284204 ECH