Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g01961 ATGACGGACGCCACCGCCGTTGACTCAGCATCGAACGGCGAGCCCAACCAGAAGCGAACTAGAGAGGACAACGTTGACGAAGAAAACGGCGTTTCgaagaagcagaaggtggaggcagaagaaaaacgttcgaacggagaggatgaagaagagaagaagaaACCCTCAGGTCCCGTGAAATTGGGGTTCAAAAACTTCGCTTCTTCCGTCGAAATGTTCGATTATTTCTACAATCTCCTTCATACCTGGCCCCCCAATCTCAATCTTAACAAGTATGAACATACAATGTTACTGGAATTGCTTAAGAAGGGCCATGCAGAGGGTGATGATAAGATTGGAGGAGGAATCCGTGTTTTTCAAGTCCGGAAGCATCCAATGTGGAAAAGTAGGTGCTTCTTCCTCATCAGAGAGGATGAATCTGTTGATGATTTTAGCTTCCGCAAATGTGTGGATCATATTGTTCCCTTGCCAGAAGAGATGCAGGTGAAAGCTGATGCAAACAAGGCATTGGGTGGAGGAAAGCGTCATCATGGGAGAAAGGGAGGGTCCAAACATTGA 558 0.414 MTDATAVDSASNGEPNQKRTREDNVDEENGVSKKQKVEAEEKRSNGEDEEEKKKPSGPVKLGFKNFASSVEMFDYFYNLLHTWPPNLNLNKYEHTMLLELLKKGHAEGDDKIGGGIRVFQVRKHPMWKSRCFFLIREDESVDDFSFRKCVDHIVPLPEEMQVKADANKALGGGKRHHGRKGGSKH 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g01961 185 MobiDBLite consensus disorder prediction 15 58 - -
Cca11g01961 185 Pfam Protein of unknown function (DUF3223) 78 150 - -
Cca11g01961 185 Gene3D - 55 154 - -
Cca11g01961 185 PANTHER - 7 182 IPR044673 -
Cca11g01961 185 PANTHER PROTEIN EMBRYO DEFECTIVE 514 7 182 - -
Cca11g01961 185 MobiDBLite consensus disorder prediction 1 58 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g01961 Cca-Chr11 45006749 45008011 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g01961 - - gmx:100305757 257.684
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca11g01961 11 45006749 45008011 Cca11g01961 11 45006749 45008011 ECH