Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g01926 ATGGATCGCCAATGGCGTCCTTCCCCTCCGCCAATCCAACCCAATCTCTGCCCTACCTGCTTCCTCTCACACTTCCCATTTTGCCCTCCACCACCCCACCCTTTCCCTTACAAGAGACCCCGAATCGACGACAATTTCTCCGACGACCAACGCCGATTGAAGCTGATTCGCGATCACGGCAccaacccccctcaaccccaccacacccacaccgccttccctccccacAATGCTCATTTCAGATCTTCCCCCCATCCATCGCACCACTATCCCCATCCCTACCCCTACCCCTTTTCCGATAACATCGACGCTTCCAGATTCTTCAGgcctccacctccgcctccgcctccgcctccgcctccacctccTCCCCCTCTCCCTTCTTCTCCGCCGCCACCTCTTCCCATGGAACCACCCATCAACCAGTTCAAAACCTACTTTTCCCCACCCTCTCTTTTCCCCGTTCCCGTTAGTTCCTCTCCTTCGTCCTTTTCGCAGCCTCCCGAGCCCTATTATCACGCTAAACCACCCCTTCCGGAGTATCCCATTCCCACCGTTTTTCCTTCCGAGCAGGAACCCTCGAAGCAGTACTTGGGGGATTCCCAACCTTATTCGTTAAACAAGTTTGCTGCTCACAGGCCTAAGTTCATCGATGCTTCACATTTGTTCCGGCATCCGCATCGAGCTTCGCGCCCTGATCATTTTGTCATCATCTTTCGCGGCCTTCCAGGTAGTGGTAAGAGTTACTTGGCAAAGATGTTGCGTGATCTTGAGGTTGAAAATGGCGGTGATGCTCCACGAATTCATTCTATGGATGATTATTTTATGACTGAGGTTGAAAAGGTTGAGGATAGTGAGACATCAAAATCTTCAAGTTCAGGCAGAAACAAGAAGCCCGTAATGAAGAAGGTCATGGAGTATTGTTATGAACCTGAAATGGAGGAGGCTTATCGGTCAAGCATGTTGAAATCTTTCAAGAAAACTGTTGAGGAAGGAGTTTTCACCTTTATTATTGTGGATGACCGCAATCTGCGGGTAGCTGATTTTGCTCAATTTTGGGCAACTGCAAAGAGATCGGGGTATGAAGTTTATATTTTGGAAGCTACATACAAGGACCCTGCGGGTTGTGCAGCGAGGAATGTCCATGGATTTACACAGGAAGACATAGAAAAGATGTCTAAGCAATGGGAAGAAGCTCCATCCATGTATCTGCAGCTTGATGTGAAGTCATTATTTCATGGAGATGATCTAAAGGAAAGCAGAATAAAGGAGGTTGACATGGATATGGAAGATGATATGGGTGATGCATTTCCTCTTGTTCAAGGAAGAGAAGCTGAGAAAGTTGTTGACCCTCCTGTTGGGGAAGATGCAAGTGTGCTAAAGGCTGGGAAGAGTTGGGATGCTGAAAGGGAACATCCGACAGAAGTCAGGGAATTGGGTAAAAGCAAATGGTCAGAAGATTTCGGTGAAGATGACAATGATCAAACTGAAGGTATGAAGGGCAATATTAATGCTCTGTCTGGGTTAATTCATCAATATGGCAAGCAACGAAAATCTGTACATTGGGGTGATCAGGTATGA 1581 0.4434 MDRQWRPSPPPIQPNLCPTCFLSHFPFCPPPPHPFPYKRPRIDDNFSDDQRRLKLIRDHGTNPPQPHHTHTAFPPHNAHFRSSPHPSHHYPHPYPYPFSDNIDASRFFRPPPPPPPPPPPPPPPPLPSSPPPPLPMEPPINQFKTYFSPPSLFPVPVSSSPSSFSQPPEPYYHAKPPLPEYPIPTVFPSEQEPSKQYLGDSQPYSLNKFAAHRPKFIDASHLFRHPHRASRPDHFVIIFRGLPGSGKSYLAKMLRDLEVENGGDAPRIHSMDDYFMTEVEKVEDSETSKSSSSGRNKKPVMKKVMEYCYEPEMEEAYRSSMLKSFKKTVEEGVFTFIIVDDRNLRVADFAQFWATAKRSGYEVYILEATYKDPAGCAARNVHGFTQEDIEKMSKQWEEAPSMYLQLDVKSLFHGDDLKESRIKEVDMDMEDDMGDAFPLVQGREAEKVVDPPVGEDASVLKAGKSWDAEREHPTEVRELGKSKWSEDFGEDDNDQTEGMKGNINALSGLIHQYGKQRKSVHWGDQV 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g01926 526 MobiDBLite consensus disorder prediction 38 64 - -
Cca11g01926 526 PANTHER YLP MOTIF CONTAINING PROTEIN NUCLEAR PROTEIN ZAP 179 525 IPR026314 GO:0005634
Cca11g01926 526 MobiDBLite consensus disorder prediction 465 501 - -
Cca11g01926 526 MobiDBLite consensus disorder prediction 105 141 - -
Cca11g01926 526 Gene3D - 235 401 IPR027417 -
Cca11g01926 526 MobiDBLite consensus disorder prediction 38 87 - -
Cca11g01926 526 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 234 407 IPR027417 -
Cca11g01926 526 MobiDBLite consensus disorder prediction 465 497 - -
Cca11g01926 526 MobiDBLite consensus disorder prediction 107 139 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g01926 K17602 - gmx:100775851 711.064
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca11g01926 11 44590554 44599180 Cca11g01926 11 44590554 44599180 ECH