Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g01925 ATGGCCAGTTCTAGAGGTACTACAAGGGTTGGAGTAAGAACAAGGGCACCAACTCCAGTTGTTGAAGAGACAGTACCTAATTCTGGATGGACAGAGGATTCTGCGGGTCATTACCTTCTTGTGGATCTTCCCGAATTCAGGAGGGAAGAGGTGAAGCTCCAGGTTGATAGCTATGGCCGTATTCTTGTATCGGGAGAAAGGCAAGTGAATGAGTGGAAACATGTTCAATTTCGGCTGAATTTTCCGGAACCAGTGGACTCTGATATGGATAAGATAACTGGGAAGTTTGATGGTGGAGTCCTTTATGTCACTGTTCCCAAGCGAGTCACACAACAGAACAAGGAAAGCGAGGCTGCAAAAGCTGGAAATAGCCAAGTTGAAAGAGCAGAAAATGATAGCCATAATAGAAATGGCGAAGATGAAAAAGCAGAAGAAAATGATAGCCATCAACATGGAAATGGCAAAGTTGAAAGATTAGAAGAAAATGATAGGCAAGCACCCAATAATGCTGATGTGGGGAGGAGAGATCCCAGCCAACATGACAACCATGCAGGGCAAGAAATAAAAAGAAATGAAAATGAGCACATCGGAGATTTTCCTGAACAAGTAATGAGGAATTGGGATCAAGAATCCATGTTAAGAACTGCAGCGGGGATTTTGAGGAAAAACAAAGGAATTGTAATAACAGCTGTTATAGCCTTTTCCTTGGGGTTGTTAATATCTCGCAAATTCAACACCACCTAA 744 0.4261 MASSRGTTRVGVRTRAPTPVVEETVPNSGWTEDSAGHYLLVDLPEFRREEVKLQVDSYGRILVSGERQVNEWKHVQFRLNFPEPVDSDMDKITGKFDGGVLYVTVPKRVTQQNKESEAAKAGNSQVERAENDSHNRNGEDEKAEENDSHQHGNGKVERLEENDRQAPNNADVGRRDPSQHDNHAGQEIKRNENEHIGDFPEQVMRNWDQESMLRTAAGILRKNKGIVITAVIAFSLGLLISRKFNTT 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g01925 247 MobiDBLite consensus disorder prediction 127 195 - -
Cca11g01925 247 MobiDBLite consensus disorder prediction 111 195 - -
Cca11g01925 247 PANTHER HEAT SHOCK PROTEIN 26 11 245 IPR045045 -
Cca11g01925 247 Gene3D - 12 115 IPR008978 -
Cca11g01925 247 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 19 122 IPR002068 -
Cca11g01925 247 SUPERFAMILY HSP20-like chaperones 23 114 IPR008978 -
Cca11g01925 247 Pfam Hsp20/alpha crystallin family 31 114 IPR002068 -
Cca11g01925 247 PANTHER INACTIVE PROTEIN RESTRICTED TEV MOVEMENT 2-LIKE 11 245 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g01925 Cca-Chr11 44586191 44587654 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g01925 - - ccaj:109807613 487.263
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca11g01925 11 44586191 44587654 Cca11g01925 11 44586191 44587654 ECH