Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g01921 ATGGAGGAAGCACAGGTGCACGTGTGGGAAGGGTATGTAGATTGGAGGAACAGACCAGCCATAAGAGGACATCATGGTGGCATGCTTGCCGCTTCCTTTGTTTTGGCCGCTGAGGTATTGGAGAACCTTGCATATCTTGCCAATGCAAGCAACCTTGTTTTATATCTATCCAAGTTTATGCACTTTTCACCATCCACCGCTGCCAACATTGTCACTGACTTCATGGGAACATCCTTCCTCCTTGCTGTTCTTGGTGGGTTTCTGGCTGATGCATTTATCACCACTTATTCCATCTATCTCATAAGTGCTGCAATAGAATTCATGGGTTTATTAATGCTGACAATACAAGCTCACAAGCCATCACTGGAGCCACCACACTGTGTTATGGGAAAGACCCACAGTCCATGCCATAACATTCATGGTGGGGACGCAGTTATGCTATTTGCAGGCCTCTATCTAGTGGCTCTTGGCGTAGGAGGTATAAAAGGTTCACTTCCTCCTCATGGAGCTGAGCAGTTTGATGAGAATACCCCAGAGGGAAGGAAGCAGAGATCTTCATTTTTCAATTACTTTGTTTTCAGCCTGTCATGTGGTGCATTAATTGCAGTAACTTTTGTGGTATGGATTGAAGACAACAAGGGATGGCAGTGGGGTTTAGGAGTCTCAACTGCATCAATACTTCTCTCCATTCCAGTGTTTCTTCTTGGTTCACACAAGTACAGGACCAAGATTCCAGCAGGAAGCCCCATCACATCCATGTTCAAGGTTCTCGTTGCAGCAATTTGCAACAACTGCAAAGCCAGGAATTCAAGCAATGCTGTCATAAGCATGCCCACAAGTCCATCCCATGAAACTGAAAGGGATGATGGAGGAGAAAAAATTAACACTAGAAAAGAGGTGGTAGACCAAAGCCAAACTCTAACTTCAAACCTTAAATTCCTTAACAAAGCAATGATGGAACCGGTTCACCCAATGTTAGAGTGCACAGTTAAGGAAGTGGAAGAGGTGAAGATTGTGATAAAGATTCTTCCCATATTCATGTCCACCATAATGCTAAACTGCTGCCTAGCTCAGCTATCAACCTTCTCAGTCCACCAATCAGCCACCATGAACACCATGCTTGGTTCCTTCAAGGTCCCACCAGCTTCTCTTCCTGTGTTCCCTGTCCTCTTCATCATGATCATTGCCCCACTCTACAACGACATCATTCTTCCATTTGCTAGAAAAGCCACCAAAACCGAAATGGGGATCACACACCTACAAAGAATAGGGACAGGCCTGTTTCTCTCCATTGTGGCAATGGCTGTGGCAGCTTTGGTGGAAACCAAGAGAAAGAAAACAGCTTCTAAACTTGGTTTACTAGACTCAACCAAACCCCTTCCCATAACATTCCTTTGGGTGGCTTTGCAGTACATTTTTCTTGGCTCAGCTGATCTTTTCACCTTGGCTGGCATGATGGAGTTCTTCTTCACAGAGGCACCATGGAGCATGAGGTCTTTGGCCACAGCACTTTCATGGGCCTCACTGGCCATGGGGTACTTCCTCAGCTCAGTTCTTGTGTCCGTCATCAATAAGGCCACAGGAGCTTTTGGACACACACCATGGCTCTTAGGTGCCAACTTGAATCACTATCACCTTGAGAGGTTTTACTGGTTGATGTGTGTGCTTAGTGGACTCAACTTCATTCATTTTCTCTTCTGGGCCACTTCCTACAAATATAGATATTCAACAAAGCATGGATTCTAG 1746 0.453 MEEAQVHVWEGYVDWRNRPAIRGHHGGMLAASFVLAAEVLENLAYLANASNLVLYLSKFMHFSPSTAANIVTDFMGTSFLLAVLGGFLADAFITTYSIYLISAAIEFMGLLMLTIQAHKPSLEPPHCVMGKTHSPCHNIHGGDAVMLFAGLYLVALGVGGIKGSLPPHGAEQFDENTPEGRKQRSSFFNYFVFSLSCGALIAVTFVVWIEDNKGWQWGLGVSTASILLSIPVFLLGSHKYRTKIPAGSPITSMFKVLVAAICNNCKARNSSNAVISMPTSPSHETERDDGGEKINTRKEVVDQSQTLTSNLKFLNKAMMEPVHPMLECTVKEVEEVKIVIKILPIFMSTIMLNCCLAQLSTFSVHQSATMNTMLGSFKVPPASLPVFPVLFIMIIAPLYNDIILPFARKATKTEMGITHLQRIGTGLFLSIVAMAVAALVETKRKKTASKLGLLDSTKPLPITFLWVALQYIFLGSADLFTLAGMMEFFFTEAPWSMRSLATALSWASLAMGYFLSSVLVSVINKATGAFGHTPWLLGANLNHYHLERFYWLMCVLSGLNFIHFLFWATSYKYRYSTKHGF 581
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g01921 581 Gene3D MFS general substrate transporter like domains 2 579 IPR036259 -
Cca11g01921 581 CDD MFS_NPF4 28 568 - -
Cca11g01921 581 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 11 576 IPR000109 GO:0016020|GO:0022857|GO:0055085
Cca11g01921 581 SUPERFAMILY MFS general substrate transporter 37 568 IPR036259 -
Cca11g01921 581 Pfam POT family 100 536 IPR000109 GO:0016020|GO:0022857|GO:0055085
Cca11g01921 581 PANTHER PROTEIN NRT1/ PTR FAMILY 4.7 11 576 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g01921 Cca-Chr11 44557516 44562392 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca11g01921 3 574 Organic Solute Cotransporters AT1G69850 67.126 0.0 785
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g01921 - K14638 gmx:100802175 1028.08
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca11g01921 11 44557516 44562392 Cca11g01921 11 44557516 44562392 ECH