Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g01904 ATGAAGACGACCAAGGGCGGCAAAGTCATGAACCCTACCGATGCTTACCGAAAGGAGCTTCGCAAGAAGGAATTGAAACGGAATAAGAAAGAAAGGAAAAAGGTGAGGGAGGTGGGGATTTTGAAGAAAGATCCTGAACAATTGAAGAAGCAGATTGAGAACTTGGAAATGATGAAGGCTGATGGTGCTTTGGATAAAGCAAGAAAGCACAAGAAGAGACAGCTACAAGATACACTTAACCTTGTCCTAAAGAAGAGGAGGGAATATGAAGATAAAATGCGGGAGAAGGGCGAGACCCCTGTCATGTTCAGTCATTTGGGGCCTCCTCGAAGGAGAACAACTGCAGAAGAAGAAGAGAGGGTTAAGCACCCAAAGCCTGAGGACTCTGTTTATTATCATCCTACATTAAACCCTACTGGGGCTCCACCACCAGGGAAACCTCCTATGTTTAAATCATCTATAGGACCCAGAATTCCTTTGTCCGGTGCTTCATCAAGTACTGCTGCATCATCCTTGGCAACAGAGTCAGAGGATGATGTATTAGCTGTACCTCCACCTCCCCCGCCGCCTCCACTTCCTGATGGTAGCAGTACGAGTTCAGCAGATGGTGCTGTTTTACCAGCATCTTTGCCATTGCCTCCTCCCCCTCCCATGCCTCCAAAGCCAGCTACTGCTGTGCCGACATCATTACCACCGCCTCCTTTGCCACCTCCACCTCCTCCACCTAAAGAACAAGTTGCAAATCGTCCTATTCCTCCTCCCCCACCACCTCAACAACAGTCTCAACCACCTCCACCTGGCACCAGTGGAGGTGAAGGGAGAAATCAGTCTGCATTGACAGATGATTCACCTTCCAAGGAGCCTGGTCAGGTGCAGCTTCCTCCACCTCCTCCACCTAGTCAGGTGCCACCGAAGGCTGGTGTGGTTCAGTCTGATGGTGCTATGGTTTCTACTGAGAATAAGAATTCTATGGCAAGCCAGGAGATCCAAAAAATTGTTGCTGGGCATCCTCCTCCAAGGCAACAACCCCCTGTTCCTGGACCCCCCTTAATCCCAAGTTTACAGCCTGATGTATTACCCCCTGGAATATCCCGTTTCCCACCACCCCCGCCACCACCTGATATGAGGCCTCCTTTACCCGTGGCAGGACTCTCTGCTCAGGCACCACCTCCTGGAATGATGGTCCCCTTAATGCCAAGGCCACCATATGGTCCTCCACCTGGGCCTCCTCCAATGATGAGACCTCCACTTCCACCAGGTCCTCCGCCAAACTTCCAGGAAGGGGATCATATGGCAAATATGCCACCACTTCCTCCTCCAAAACCATCATATGTTAAATCTGCTGCTTCTACTGTTGTTAAAAGGCCATTAGCTCAGCACACTCCAGAACTCACAGCTATGGTTCCTGCATCTGTGCGAGTGAGAAGAGAAACTGCAATGACTAAATCAAAACCAAAACCGTCATTGCCAATCCCTAGGTCAGTCTCTGGGACGTCAGGACCGACTATTGTAAAATCAGAGTCGGTGAGTTCGTCATCGGCCCCAAAAGCACAGAGCATTGATGACTCGTATACAGCTTTCTTAGAGGACATGAAAGCCCTTGGTGCACTTGATGGTTGA 1620 0.4988 MKTTKGGKVMNPTDAYRKELRKKELKRNKKERKKVREVGILKKDPEQLKKQIENLEMMKADGALDKARKHKKRQLQDTLNLVLKKRREYEDKMREKGETPVMFSHLGPPRRRTTAEEEERVKHPKPEDSVYYHPTLNPTGAPPPGKPPMFKSSIGPRIPLSGASSSTAASSLATESEDDVLAVPPPPPPPPLPDGSSTSSADGAVLPASLPLPPPPPMPPKPATAVPTSLPPPPLPPPPPPPKEQVANRPIPPPPPPQQQSQPPPPGTSGGEGRNQSALTDDSPSKEPGQVQLPPPPPPSQVPPKAGVVQSDGAMVSTENKNSMASQEIQKIVAGHPPPRQQPPVPGPPLIPSLQPDVLPPGISRFPPPPPPPDMRPPLPVAGLSAQAPPPGMMVPLMPRPPYGPPPGPPPMMRPPLPPGPPPNFQEGDHMANMPPLPPPKPSYVKSAASTVVKRPLAQHTPELTAMVPASVRVRRETAMTKSKPKPSLPIPRSVSGTSGPTIVKSESVSSSSAPKAQSIDDSYTAFLEDMKALGALDG 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g01904 539 Coils Coil 13 33 - -
Cca11g01904 539 MobiDBLite consensus disorder prediction 337 385 - -
Cca11g01904 539 MobiDBLite consensus disorder prediction 313 329 - -
Cca11g01904 539 Coils Coil 72 92 - -
Cca11g01904 539 PANTHER WW DOMAIN-BINDING PROTEIN 11 2 538 IPR019007 GO:0006396
Cca11g01904 539 MobiDBLite consensus disorder prediction 1 33 - -
Cca11g01904 539 MobiDBLite consensus disorder prediction 208 264 - -
Cca11g01904 539 MobiDBLite consensus disorder prediction 492 518 - -
Cca11g01904 539 MobiDBLite consensus disorder prediction 289 304 - -
Cca11g01904 539 MobiDBLite consensus disorder prediction 158 174 - -
Cca11g01904 539 PANTHER WW DOMAIN-BINDING PROTEIN 11 2 538 - -
Cca11g01904 539 MobiDBLite consensus disorder prediction 265 287 - -
Cca11g01904 539 MobiDBLite consensus disorder prediction 89 518 - -
Cca11g01904 539 Pfam WW domain binding protein 11 7 83 IPR019007 GO:0006396
Cca11g01904 539 MobiDBLite consensus disorder prediction 392 425 - -
Cca11g01904 539 MobiDBLite consensus disorder prediction 110 129 - -
Cca11g01904 539 MobiDBLite consensus disorder prediction 181 195 - -
Cca11g01904 539 Pfam mRNA biogenesis factor 126 186 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g01904 - - gsj:114393646 666.381
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca11g01904 11 44294798 44302012 Cca11g01904 11 44294798 44302012 ECH