Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g01833 ATGATGAGGCCAAAGATAGTGCTGTTTGGAGATTCCATAACGGAGCAATCGATCCATGAGAATGGATGGGGTGTTTCGCTTGCCAAGGCCTATTCTCGCAAGGCTGATGTTCTTGTTCGTGGTTATGGCGGATACAACACTAGGTGGGCTATGTTCTTACTGCATCACCTCTTCCCTATGGACTCTACTTCAGCACCTATTGCTACCACGATTTTCTTCGGTGCTAATGATGCAGCTTTGTTGGAAAGAACCAGTGAAAGACAACATGTACCTATTGAAGAATTCAAAGAGAACCTCAGAAAATTTGTTCGACATTTAAAGGAATGCTCACCAACTATGCAAATTGTGATTATTACTCCACCTCCAATTAGTGAGGAAGGACGCCTAGCATATGCAATATCCGTATATGGCACGAATGCTAGCAAATTGCCTGAAAGAACAAATGAAGTAACTGGTCAATATGCAAACGCATGTGTTGAGATAGCAAAGGAAATGGGCGTGTGGCATATCAATCTATGGTCGAAAATGCAAGAAACAGATGGCTGGCAAACGAAATTTTTGCGTGATGGGTTGCACCTGACAACAGAAGGAAATGCAGTAGCCTATGGAGAAGTGATAAAGGTGTTCAAGGAAGCAGGGCTTTCTGCTGATGAAATGCCACTTGATTTCCCACACCACTCAAAAATTGATTACAAACATCCTGAGAGAGCTTTCCAGCAGAATGTTTGTGATATCGCGTTGTGA 744 0.4288 MMRPKIVLFGDSITEQSIHENGWGVSLAKAYSRKADVLVRGYGGYNTRWAMFLLHHLFPMDSTSAPIATTIFFGANDAALLERTSERQHVPIEEFKENLRKFVRHLKECSPTMQIVIITPPPISEEGRLAYAISVYGTNASKLPERTNEVTGQYANACVEIAKEMGVWHINLWSKMQETDGWQTKFLRDGLHLTTEGNAVAYGEVIKVFKEAGLSADEMPLDFPHHSKIDYKHPERAFQQNVCDIAL 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g01833 247 CDD Isoamyl_acetate_hydrolase_like 5 208 - -
Cca11g01833 247 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE FAMILY PROTEIN, EXPRESSED 2 240 - -
Cca11g01833 247 Pfam GDSL-like Lipase/Acylhydrolase family 8 199 IPR013830 -
Cca11g01833 247 PANTHER ISOAMYL ACETATE-HYDROLYZING ESTERASE 1 2 240 IPR045136 -
Cca11g01833 247 Gene3D SGNH hydrolase 2 237 IPR036514 -
Cca11g01833 247 SUPERFAMILY SGNH hydrolase 3 210 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g01833 Cca-Chr11 43346295 43350308 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g01833 K23978 - gmx:100782709 449.899
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca11g01833 11 43346295 43350308 Cca11g01833 11 43346295 43350308 ECH