Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g01826 ATGCCTCCACTGCTGTATCTCATCCTCTCAGCATACTTAATCCCTATAAGCCAGTGCCACCCGAACACGTGTCGGTCCTACTGCGGCAACATAACCATAGACTACCCATTCGCGGTCCAATACGGGTGCGGGCACCCTGGCTTCCGCGACCTCCTCTACTGCATAAACGACGTCCTCATGTTCCACATAAGCTCAGGCTCCTACAGGGTCCTCGAGATAGACTACGCCTACCAGGCCCTCACGCTCCACGAGCCCCACATGTCCACGTGCCACAACCTCGTCCTCGGATCCCGAGGCAACGGCTTCGCGCTCGAGCCCTGGCGCGCCCCCTACATGAACCCCGCCGCCGACAACGTCTTCATGCTCATCGCCTGCTCCCCCCGCTCCCCCCTCTTCCAGGGCTTCCCCGGGAAGCACCTCCCCTGCCGCAACGTCTCCGGCATGGGCTGCCAGGACTACTATTCCTGCCCCGCCTGGGAGATGATGGGCCACAAGCCACTGGGCTCCCCCTCCTTTTTCGGCTCCGGCCCGCCCGAGTGCTGCGCTCTTCCCTACGAGGCCATTAGGGGGATTAATCTCACCAAGCTCCAGTGCGAAGGCTATACCAGCGCTTATAGTGTCGCTCCGCTCAGGGTCCATGGGCCTGGGGACTGGTCCTATGGGATCCGCGTCCGCTATTCCGTGCAAGGGAATGATGAGTTCTGTGGAGCCTGTGAGGCCACGGGTGGCTCCTGTGGCTTTGCTTCTGATGGGATCAGACAGCTCTGTATGTGCGGGGACTTCAATTCCACCTCCAATTGTGATTCTGATTCAGTTGCCATATCCTCAGGAGCAAGGCCTGTGTGTACCAGAGTAAAACTATTAGCAGGACTATTGGCGTATGTGGTAGCGTCGATGACAACATACCTGATTTCAAAAGTATGGTAA 927 0.5836 MPPLLYLILSAYLIPISQCHPNTCRSYCGNITIDYPFAVQYGCGHPGFRDLLYCINDVLMFHISSGSYRVLEIDYAYQALTLHEPHMSTCHNLVLGSRGNGFALEPWRAPYMNPAADNVFMLIACSPRSPLFQGFPGKHLPCRNVSGMGCQDYYSCPAWEMMGHKPLGSPSFFGSGPPECCALPYEAIRGINLTKLQCEGYTSAYSVAPLRVHGPGDWSYGIRVRYSVQGNDEFCGACEATGGSCGFASDGIRQLCMCGDFNSTSNCDSDSVAISSGARPVCTRVKLLAGLLAYVVASMTTYLISKVW 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g01826 308 Pfam Wall-associated receptor kinase galacturonan-binding 24 82 IPR025287 GO:0030247
Cca11g01826 308 PANTHER WALL-ASSOCIATED RECEPTOR KINASE GALACTURONAN-BINDING PROTEIN 15 293 - -
Cca11g01826 308 PANTHER WALL-ASSOCIATED RECEPTOR KINASE CARBOXY-TERMINAL PROTEIN-RELATED 15 293 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca11g01826 4 131 Receptor kinase-like Gene Family AT1G21240 28.571 6.26e-06 45.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g01826 - - gmx:100818252 570.852
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca11g01826 11 43269347 43270774 Cca11g01826 11 43269347 43270774 ECH