Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g01820 ATGAAGAAGAGCGAGGCGTTGACGGTGGCAGTCAACGTGATGTGTTTAGTTATGATTTGCGCTGCGGTCGAGATCGAGTCCCCACAGTACACAATCGTACACTCCGAATCCGATTTCGAGGTGAGGCTCTACCGAAGCTCCGTGTGGATGTCCGCTCCCGCTCTCGACATTTCCTTCGAGAAAGCCACCTGGAACGGCTTCCACAGGTTGTTCCAGTTCACCGAAGGCGCCAACCTCAATTTCTCCCGAATCCCAATGACCCTTCCCGTCCTCACCACCACCGTCCCCGCCGCCGGTCCCCTTCAATCCCAAGGCTATTACGTTAGTCTCTACTTACCCGTTAAGTTCCAGGCCACTCCACCGCTGCCGCTCCCCCAACTCAACATCAAACCCTATGAGTTCAGCAGCCACTGcgtcgccgtcagaatgttctctggattcgccaaggatgagagggttgtcaaagagGCCCAAAAGCTCGCCACCACTCTAAGTAGCTCTCCCTGGGCTCACTCCCAGACTCGCCCTGGCTACTCCATTGCGCAGTACAATACTCCCTTCCGAATTGTCAAACGCAAAAATGAAGAGGATGGATATCAGAATGCTTCGCTACTTGGACAGTTTTGGAGAACGGATGAGAAGCTGAAAGCAACTTCATATAGCCATCAAACCAAACTACTGATTTCTTACCTAGTTCACACTTTGTTTCGTTCTCTCTCTTATTTTCTCTCTCGCGTGCCCTTCTCGCTCTCCGATCCGAAACCACCCATCGCCTCTATCTCCCGTAGATCTCTCTTTCTCGGCCTCACTCCACACCTTACACCAAATTCCCCAAAACTTCTGATCGCATATTCCTCCTTTTTTCCATCTCTCTTTTCGCACCTCTCTGCAATTGCCTCTCTAGGGTTTCTCCCAGCCATCGGATTTTCCAGTTCCATCTGGCCTTCCAATTTGATTGAATGA 963 0.4829 MKKSEALTVAVNVMCLVMICAAVEIESPQYTIVHSESDFEVRLYRSSVWMSAPALDISFEKATWNGFHRLFQFTEGANLNFSRIPMTLPVLTTTVPAAGPLQSQGYYVSLYLPVKFQATPPLPLPQLNIKPYEFSSHCVAVRMFSGFAKDERVVKEAQKLATTLSSSPWAHSQTRPGYSIAQYNTPFRIVKRKNEEDGYQNASLLGQFWRTDEKLKATSYSHQTKLLISYLVHTLFRSLSYFLSRVPFSLSDPKPPIASISRRSLFLGLTPHLTPNSPKLLIAYSSFFPSLFSHLSAIASLGFLPAIGFSSSIWPSNLIE 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g01820 320 PANTHER HEME-BINDING PROTEIN-RELATED 9 195 IPR006917 -
Cca11g01820 320 SUPERFAMILY Probable bacterial effector-binding domain 15 195 IPR011256 -
Cca11g01820 320 PANTHER SOUL HEME-BINDING PROTEIN-RELATED 9 195 - -
Cca11g01820 320 Gene3D Regulatory factor, effector binding domain 24 196 IPR011256 -
Cca11g01820 320 Pfam SOUL heme-binding protein 25 195 IPR006917 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g01820 Cca-Chr11 43197645 43205428 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g01820 - - gmx:100306073 331.643
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca11g01820 11 43197645 43205428 Cca11g01820 11 43197645 43205428 ECH