Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g01802 ATGCGCTTTATTGAAGTAGTTTTGTTGGAACCAGATAAACATGTTGTTGCACTGGCAGATGCTTATTTCTTTCCACCTTTCCAACCTTCATTACTTCCTATAGCTAAAGGAGGGGCAGTAATTCCCGTTAAACTTCCCCCAAGACGTGCTAGACTCGTTGTTTACTATAGGAAGACAAATGAGACTAGTATATGGATTGTTGAATTATCACAAGTACATGCAGTAACTCGAGGAGGTCATAACCGTGGGAAAGTCATTTCATCACACGTTGTTCCAGATGTTCAGCCTCCAATTGATGCTATGGAGTATGCAGAATGTGAAGCTGTTGTTAAAGATTTTACTCCATTTAGAGAGGCCATGAAGAAAAGGGGCATTGAAGACATGAACCTCGTAATGGTTGATGCATGGTGTGTTGGTTATTACAGTGAAGCAGATGGTCCGAATCGTAGACTTTCTAAGCCACTTATATTTTGCCGAGCCTCAAGTGACTGCCCTATGGAAAATGGCTATGCACGCCCAGTTGAGGGCATCTATGTGCTTGTTGATATGCAAAACATGTCAGTCATTGAATTTGAAGACTATAAACATGTTCCTCTGCCTCCGGTTGATCCCTTGAGGAACTATACACATGGTGAAACAAGTGGTGGATCTGATAGAAGTGATATAAAACCCTTGCAAATTGTTCAGCTTGAAGGTCCAAGCTTTCGGGTTGATGGGTCTTATGTTGAATGGCAAAAGTGGAACTTTCGTGTTGGATTTACGCCCAGAGAAGGTTTGGTTATATATTCGGTTGCGTATGTTGATGGTAGTCAAGGGAGAAGGTCTGTAGCTCATAGGCTGAGTTTTGTGGAGATGGTTGTACCATATGGAGATCCTAATGAGCCACACTATAGGAAGAATAGTTTTGATGCTGGGGAAAATGGCTTGGGGAAAAATGCACATTCTCTCAAGAAGGGATGTGATTGTTTGGGCTACATTAAATACTTTGATGCTCATTTCACAAATTTCACTGGTGGAGTTGAGACAATTGAAAATTGCGTTTGTTTGCACGAAGAGGATCATGGAATTCTGTGGAAGCATCAAGACTGGAGAACTGGCTTAGCAGAAGTCCGAAGGTCTAGAAGACTTTCAGTTTCTTTTATGTGCACTGTGGCTAACTATGAGTATGGATTTTTTTGGTACTTTTATCAGGATGGAAAAATTGAAGCTGAGGTTAAGCTAACTGGAATTCTAAGCTTAGGAACCTTGTTACCCGGAGAGTTTCGTAAATATGGAACCATGATTGCCCCAGGTCTTTATGCTCCAGTTCATCAACACTTCTTTGTAGCTCGCATGAATATGGCTGTGGATTCTAAACATGGTGATGCTTTGAATCAGGTCGTGGAGATCAATGTCAAAGTTGAGGAACCAGGGGAGCATAATGCTCACAACAATGCATTTTTTGCTCAAGAGACTCTGCTCAGATCTGAATTGGAAGCCATGCGTGATTGCAATCCTTTGACTGCTCGACATTGGATTGTAAGGAACACAAGAATAGGCAATAGAACTGGACAGTTGACAGGCTATAAGCTAGTACCTGGTTCAAATTGTTTACCTTTAGCAGGTTCTGATGCCAAATTTTTAAGAAGAGCTGCTTTCTTGAGGCATAATCTTTGGGTAACACCCAATTCACACGATGAAATGTTTCCCGGAGGAGAATTTCCTAATCAAAATCCACGTGCCAACGAAGGAGTAGCTACATGGGTTAAGCAAAACCGATCTTTGGAAGAAACTGATATAGTTCTTTGGTATGTATTTGGAATGACACACATCCCTCGTTTAGAAGAGTGGCCAGTTATGCCAGTAGAACGCATTGGTTTCATGCTCATGCCTCATGGATTCTTCAACTGTTCACCTGCAGTGGATGCCCCTCCTAGTCCATGTGAGTTGGATTCTAAAGATAGTGACATGAACGATACCAAGAAAACTGAGGGTGGCTTAGTGGCAAAACTTTAG 1995 0.418 MRFIEVVLLEPDKHVVALADAYFFPPFQPSLLPIAKGGAVIPVKLPPRRARLVVYYRKTNETSIWIVELSQVHAVTRGGHNRGKVISSHVVPDVQPPIDAMEYAECEAVVKDFTPFREAMKKRGIEDMNLVMVDAWCVGYYSEADGPNRRLSKPLIFCRASSDCPMENGYARPVEGIYVLVDMQNMSVIEFEDYKHVPLPPVDPLRNYTHGETSGGSDRSDIKPLQIVQLEGPSFRVDGSYVEWQKWNFRVGFTPREGLVIYSVAYVDGSQGRRSVAHRLSFVEMVVPYGDPNEPHYRKNSFDAGENGLGKNAHSLKKGCDCLGYIKYFDAHFTNFTGGVETIENCVCLHEEDHGILWKHQDWRTGLAEVRRSRRLSVSFMCTVANYEYGFFWYFYQDGKIEAEVKLTGILSLGTLLPGEFRKYGTMIAPGLYAPVHQHFFVARMNMAVDSKHGDALNQVVEINVKVEEPGEHNAHNNAFFAQETLLRSELEAMRDCNPLTARHWIVRNTRIGNRTGQLTGYKLVPGSNCLPLAGSDAKFLRRAAFLRHNLWVTPNSHDEMFPGGEFPNQNPRANEGVATWVKQNRSLEETDIVLWYVFGMTHIPRLEEWPVMPVERIGFMLMPHGFFNCSPAVDAPPSPCELDSKDSDMNDTKKTEGGLVAKL 664
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g01802 664 Gene3D - 101 203 - -
Cca11g01802 664 Gene3D - 1 99 - -
Cca11g01802 664 PANTHER AMINE OXIDASE 1 653 - -
Cca11g01802 664 SUPERFAMILY Amine oxidase catalytic domain 219 638 IPR036460 GO:0005507|GO:0008131|GO:0009308|GO:0048038
Cca11g01802 664 MobiDBLite consensus disorder prediction 645 664 - -
Cca11g01802 664 Pfam Copper amine oxidase, N3 domain 96 198 IPR015802 GO:0005507|GO:0008131|GO:0009308|GO:0048038
Cca11g01802 664 PANTHER COPPER AMINE OXIDASE 1 653 IPR000269 GO:0005507|GO:0008131|GO:0009308|GO:0048038
Cca11g01802 664 SUPERFAMILY Amine oxidase N-terminal region 95 212 IPR016182 GO:0005507|GO:0008131|GO:0009308|GO:0048038
Cca11g01802 664 MobiDBLite consensus disorder prediction 638 664 - -
Cca11g01802 664 Gene3D Copper amine oxidase, catalytic domain 212 638 IPR036460 GO:0005507|GO:0008131|GO:0009308|GO:0048038
Cca11g01802 664 Pfam Copper amine oxidase, enzyme domain 225 633 IPR015798 GO:0005507|GO:0008131|GO:0009308|GO:0048038
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g01802 Cca-Chr11 42875727 42880276 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g01802 K00276 - gmx:100817454 1245.34
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca11g01802 11 42875727 42880276 Cca11g01802 11 42875727 42880276 ECH