Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g01787 ATGGCCGAGACACGGCGCAAGGAAAAACCCGCGCCGGACCTCACCGATTTCATGAACGACATGTTTTTCGGGGCAGCAGACATGGAACACAGAGCCTACAACCTCACCGGCGGCGGAGGCGCCGCGGTGgacgacgacgacgacgacgaagggttcgacgacAGCACGAGAAGCAACAGCGCAAGGTTGACGCAAGAGTGGTTACAAGAGGCGCGACGAATCGTCGCTTCCTCTCCCTTACGCTGCGACTCCCCCGGTCGCCGCGTAGGGTCCCCGAGGTTCGCCGCCGCACAACCAGGCTCACCCCAACCCTCCTCCGACCGAAGAGACTCTCTCTCTAGAACTAGGTCTGCCCGAAGCAGATACAGAGCAGGGGAAGGGATTAGTGATGAGATACTATCGAAAACAGCGAAACATACCCGTAACAAGTCCGAGTCTGATACATTTGTTAATCCTTCATCTGATGGGGATGGATCCCCTGCAGCGGCGGTGCACAACTGGTTCACTAAAATTCTCAATCCCAACACGCCAGTCACGCCACCAGCTCCTTCTCCTGAGTCTGATTCTACTCTTTTATCTTCTCTCCCGCCACGTCAGCCTCATCCTCGAAAGTCGCGCTTCCAGACCGACCCGCAGGGGATCCCACCTCCTAATTCCAGGCGAACCTTCAAGAGTTCCGCGGCGGAGAATCCGACGGAGGGTTGCGGCGGCCCTCTGTCGCCGCCCAGGAACCTGGTGGAGTCGGCTCAGCGGAGGACGTTGTTGTCTTCGACGTGCTCGCGGGAGCGGATTGCGCCGAGGCATGTGGTTGCGAAGGGAGAGGAAGTGTGCCTGAACGGGTTCCTCAAAGAGCAGAGGGCTTTGTTGCAGAAAATATCGAGCGGGGAGCTCCGTGCGAAGGCGCAATTGGTGCTTTCTGGGCCTTCTAACAGCACGGCGTCGATGGTGGCTGCCATTTGCCACGCGTGGCTCTTGGGTTATAGGCAGAGAGAGAAGGAGGGTGGAAGCGTGGTGGTGCCTGTCATGAATGTCAAGCGAGCCTCCATGTGGAAGCTGATGCAGGCTGCGTGGCTCTTTCACCATTCTGGTCTTGATTCCACTGCATTGCTTTTCACTGATGAGGTGGACATGGAAAGACTTTTGATGACCGGCCAACTGAGTGTCCTCGTGGTTGGACAAGATGTCTTCTGCACTACTGGCGAGGTTGGATCCCAATGCACAGTTATTACCGATAATTACTGTGAGGATGCCTATGATTTACTTCAAAACCCTGTGCTGAAGAAACTACTGCTTGCTGGTATTCTGTTAGACACACAGAATCTAAAATCATCTGCGGCAATATCGATGACAAGAGATGCAGAGGCAGTCCAGTTGTTATTGGTTGGCTCAGCCCCAAATTACAGATATGCTTTATTTGATCAATTGATGCAAGACCAGAAAACTGCTTCTTTTGTCGAAGCTTTGAACCATAACTATGGGAAATCTCCTGATGAAAGTGACCAAAACATTGAAGGAAATAAGGAGTATAAAGTTCGCGAGAGAAAGTCAAGTTCTACATCTGACCGTGAACCCACCATGTCTAGTTCAAAAACAAATTCCTTCGACACAAGAAGTTCTAAAGCTAGCAAGGTTTCACCAAATCCAGTCAAACTTGTAACGCCACCTTTGCTATCTCCTACCCCAGCACCAGCACCACAACAGGCAGAAAAGGACGCCTCTCGTGGGAAAAACAAGTTCTTCTTGGCAAGGTGGTTTGGTTTTGGTTCAAAATGA 1773 0.5133 MAETRRKEKPAPDLTDFMNDMFFGAADMEHRAYNLTGGGGAAVDDDDDDEGFDDSTRSNSARLTQEWLQEARRIVASSPLRCDSPGRRVGSPRFAAAQPGSPQPSSDRRDSLSRTRSARSRYRAGEGISDEILSKTAKHTRNKSESDTFVNPSSDGDGSPAAAVHNWFTKILNPNTPVTPPAPSPESDSTLLSSLPPRQPHPRKSRFQTDPQGIPPPNSRRTFKSSAAENPTEGCGGPLSPPRNLVESAQRRTLLSSTCSRERIAPRHVVAKGEEVCLNGFLKEQRALLQKISSGELRAKAQLVLSGPSNSTASMVAAICHAWLLGYRQREKEGGSVVVPVMNVKRASMWKLMQAAWLFHHSGLDSTALLFTDEVDMERLLMTGQLSVLVVGQDVFCTTGEVGSQCTVITDNYCEDAYDLLQNPVLKKLLLAGILLDTQNLKSSAAISMTRDAEAVQLLLVGSAPNYRYALFDQLMQDQKTASFVEALNHNYGKSPDESDQNIEGNKEYKVRERKSSSTSDREPTMSSSKTNSFDTRSSKASKVSPNPVKLVTPPLLSPTPAPAPQQAEKDASRGKNKFFLARWFGFGSK 590
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g01787 590 MobiDBLite consensus disorder prediction 521 546 - -
Cca11g01787 590 MobiDBLite consensus disorder prediction 491 575 - -
Cca11g01787 590 MobiDBLite consensus disorder prediction 109 145 - -
Cca11g01787 590 PANTHER BNIP - RELATED 4 588 - -
Cca11g01787 590 MobiDBLite consensus disorder prediction 211 229 - -
Cca11g01787 590 PANTHER - 4 588 - -
Cca11g01787 590 MobiDBLite consensus disorder prediction 77 162 - -
Cca11g01787 590 MobiDBLite consensus disorder prediction 500 520 - -
Cca11g01787 590 SUPERFAMILY DHH phosphoesterases 393 492 IPR038763 -
Cca11g01787 590 MobiDBLite consensus disorder prediction 34 63 - -
Cca11g01787 590 Gene3D - 274 395 - -
Cca11g01787 590 Gene3D - 396 480 - -
Cca11g01787 590 MobiDBLite consensus disorder prediction 174 245 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g01787 Cca-Chr11 42727625 42731639 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g01787 - - lja:Lj4g3v1415280.1 709.138
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca11g01787 11 42727625 42731639 Cca11g01787 11 42727625 42731639 ECH