Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g01786 ATGGTTGCACTCAGGCTTGTGGTAGCATCACTTTTAATTTTCTGTTTAGCTGGAAGTTGCTATGGGAAGGTTCACTTCTCTTCCCTGAAAAGAACCCTTGATGTCACAGCTTCCCCCAAGCATGGACAAGTTCTGGTGGCTGGAGTAGATAAAATCACCGTAACATGGGCTTTGAACAAGACCTTACCCGCAGGGACAGACTCTGCGTACAAAACCATAAAGCTGAAGCTGTGCTACGCGCCCATAAGCCAACGAGACCGCGCGTGGAGAAAGACCGAGGATGAGCTCTCCAGGGACAAGACATGCCAACACAAGATCGTAGCCAAACCCTACGACGCTTCCAACAAAACGGTGCAGAGGTTCGAGTGGTTGGTTGAGCGCGACGTGCCCCAAGCCACGTACTTCGTACGCGCATACGCGTTTGACTCAAACGACGTCCAATTGGCTTACGGCCAGACCACGGATCCCAAGAAGAGCACCAACTTGTTCGAGATCCACGCAATCAGCGGCCGCCACGCGTCCCTTGATATCTGCTCCGTTTGCTTCAGCGTTTTCTCGGTCCTGTCGCTCTTTTTCTTCTTCTTTCTCGAGAAGAGAAAGGCTAAGGCTTCTTCCTCAAAAAGTTGA 627 0.512 MVALRLVVASLLIFCLAGSCYGKVHFSSLKRTLDVTASPKHGQVLVAGVDKITVTWALNKTLPAGTDSAYKTIKLKLCYAPISQRDRAWRKTEDELSRDKTCQHKIVAKPYDASNKTVQRFEWLVERDVPQATYFVRAYAFDSNDVQLAYGQTTDPKKSTNLFEIHAISGRHASLDICSVCFSVFSVLSLFFFFFLEKRKAKASSSKS 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g01786 208 PANTHER HIGH-AFFINITY NITRATE TRANSPORTER 3.2 5 205 IPR016605 GO:0010167|GO:0015706
Cca11g01786 208 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 20 - -
Cca11g01786 208 PANTHER HIGH-AFFINITY NITRATE TRANSPORTER 3.2 5 205 - -
Cca11g01786 208 PIRSF NAR2 1 205 IPR016605 GO:0010167|GO:0015706
Cca11g01786 208 Pfam High-affinity nitrate transporter accessory, Ig-like domain 26 170 IPR016605 GO:0010167|GO:0015706
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g01786 - - gmx:100794996 328.946
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca11g01786 11 42716017 42717875 Cca11g01786 11 42716017 42717875 ECH