Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g01753 ATGGGTACTTGTGTGGCATCCATGCTCTTGAATCTCATTACCATCCTCTGCACAGTGTCAGCTTGTTGTGCAGCAACAGCTGAGGTACGAAGCAAACCCTTCAAAAGGGTCTTCGCCTTTGGTGACTCCTTCACGGACACAGGCAACACCAAGAACGCCGAAGGACCAAGTGGCTTTGGCCACGTCTCAAACTCTCCCTACGGCACCACCTTCTTCAACCACTCCACCAACCGATACTCCGATGGAAGACTCGTCATTGACTTCGTCGCTGAAGCCCTGTCACTGCCCTACTTGCCCCCCTACCGCCACATCAGAGGCAACGACACTTTCGGTGTCAACTTCGCCGTTGCTGGCTCCACCGCCATAAACCACTTGTTCTTTGTCAGGAACAACCTCTCCCTTGACATCACTCCTCAGTCCATCCAGACCCAGATCATATGGTTTAACCGCTACCTCCAGAGCCAGGAATGTCAAGAAGCAAAGTGCAATGATTTTGATGACACTTTGTTCTGGTTTGGGGAGATTGGAGTCAATGACTATGCCTACACCCTTGGATCTTCTGTCCCTGACGACACCATAAGGAAGCTTGCCATCAGCAGTGTCTCAGGAGCTTTACAGGCATTGCTTGAGAAGGGTGCCAAGTACCTAGTGGTGCAGGGTTTGCCTCTAACTGGGTGTTTGACATTGTCCATGTATCTGGCTCCTCCTGATAATAGAGATGAGATTGGATGTGTGAGAAGTGTGAACAACCAAAGCTACCACCACAACCTTGTGCTGCAAGCCAAATTAGATGAATTCAGGAAACAGTACCCCCAAGCTGTCATACTTTATGCTGATTACTACAACGCCTACCGCACTGTCATGAAGGATCCAAGCAAATATGGATTCAAAGAGGTCTTCGACGTTTGCTGTGGATCAGGGGAACCACCTTACAACTTCAGTGTGTTTGCCACGTGTGGCACACCTAACGCCACTGTCTGCGGAAACCCTTCTCAGTACATCAATTGGGATGGTGTTCACCTCACTGAGGCCATGTATAAAGCTATTTCGAATATGTTTCTGCAAGGAAACTACACCCAACCTCCCTTTGATTTTTTGTTGGGAAAAAAAGAGAGGGTGGGGTGA 1125 0.4907 MGTCVASMLLNLITILCTVSACCAATAEVRSKPFKRVFAFGDSFTDTGNTKNAEGPSGFGHVSNSPYGTTFFNHSTNRYSDGRLVIDFVAEALSLPYLPPYRHIRGNDTFGVNFAVAGSTAINHLFFVRNNLSLDITPQSIQTQIIWFNRYLQSQECQEAKCNDFDDTLFWFGEIGVNDYAYTLGSSVPDDTIRKLAISSVSGALQALLEKGAKYLVVQGLPLTGCLTLSMYLAPPDNRDEIGCVRSVNNQSYHHNLVLQAKLDEFRKQYPQAVILYADYYNAYRTVMKDPSKYGFKEVFDVCCGSGEPPYNFSVFATCGTPNATVCGNPSQYINWDGVHLTEAMYKAISNMFLQGNYTQPPFDFLLGKKERVG 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g01753 374 Gene3D SGNH hydrolase 25 357 IPR036514 -
Cca11g01753 374 SUPERFAMILY SGNH hydrolase 33 354 - -
Cca11g01753 374 Pfam GDSL-like Lipase/Acylhydrolase 37 351 IPR001087 GO:0016788
Cca11g01753 374 PANTHER ZINC FINGER FYVE DOMAIN CONTAINING PROTEIN 10 371 - -
Cca11g01753 374 PANTHER LIPASE/HYDROLASE FAMILY PROTEIN, PUTATIVE, EXPRESSED-RELATED 10 371 - -
Cca11g01753 374 CDD SGNH_plant_lipase_like 37 357 IPR035669 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g01753 Cca-Chr11 42151955 42153919 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca11g01753 31 359 Acyl Lipid Metabolism Gene Families AT4G10950 27.326 3.72e-28 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g01753 - - gmx:100791667 674.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca11g01753 11 42151955 42153919 Cca11g01753 11 42151955 42153919 ECH