Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g01750 ATGTTGCCTCCTATCGATATCAACGCTATAAAAGATAAGGTGTCGTTTCAGTTGCGTCCTTGGCAACGCTCCTTCCAATTCTGGGTTCGAGCCATTGACATTTACACCGGATACAAGGTGTTTCAAGTGAGAGTGAATTTCGTCAGAGATGCGCAGAAGCAGGAAGCAATGTGGGAGAGGCAGCACGAGATTGCTGCCGATAAGATTTTCGCCATGTGCTCTGACCTCGGAGGTTTCTTCCTCAAGATTGCGCAAATTTTAGGGAAGCCTGATTTGGCCCCGTCTGCGTGGGTGAAAAGGCTTGTTACCCTATGTGATAGGGCTCCTCCAACCCCTTTTGATGCGGTGAAACTAGTGCTGGAGAATGAGCTGGGACAGGGTATTCATGATGTGTTTGACAGGTTCGATGTGGAACCCCTTGGCTCTGCTTCAATTGCTCAGGTTCATAGAGCAAGACTGAAAGGTGATAATGGTGATGTTGTTGTCAAGGTTCAACATCCTGGAATTCAGGATTTGATGATGACGGATATCCATAACTTGCAAGCTTTTGCTTTGTATATGCAAAAGACAGATATCAAATTTGATCTATATTCAGTGACTAAGGAAATGGAAAAACAGATTGGATATGAATTTGACTTCATGAGGGAAGCTGATGCAATGGAACGGATTAGAAAGTTCTTGCATCAAAATAACAAAAAGACTCCTGTTTTGGTGCCACGAGTAATACGAGATATGGTTACTAGAAGGGTCCTAGTTATGGAATATATTGATGGGATTCCGATAATGAATCTTGGTGATGAAATAGCAAAGAGAGGCATAAATCCTCGTGGTAAGGTTGCAGCAGCAGCAAAGCAGAAAATTCTTCAAAGCTTGACTCTAGCATATGGTCAAATGATTTTGAAAAGTGGATTCTTCCATGCAGATCCTCATCCTGGAAATATCCTGATTTGTAAAGGATCGGAGGTTGCCTTGCTAGACTATGGGCAGGTGAAGGATCTCCCAGAACAGTTGAGGCTTGGCTATGCTAATCTAGTTCTAGCAATTGCTAATGGTGACCCATTAAGAGCTGCAGAGAGCTATAGGGAGCTTGGTATAGAAACCTTGAGCAACTGTGAAAATGAGCAACAGGAATTGTTTAAACTAGCGGAGACGATGTTTGATACAAAATTGCCTCCTGGGGTGACAATGCTGCAACCTTTCTCAGAGGATTCTTCAATTAAAAAAGTTGGTGTTATGGCTTTTCCAGAAGAACTGTTTTCTGTACTTCGGACAGTTCATCTACTGAGGGGACTTAGCGTTGGACTTGGAATCAATTATTCTTGTGCAGAACAGTGGAGACCTCTAGCAGAAGAAGCTTTGTCCCGAGCTGGCAGATTTAAAGGTAAGGATGTTAAGCCCAGAGGCAGCAGAAAACACTGA 1419 0.4327 MLPPIDINAIKDKVSFQLRPWQRSFQFWVRAIDIYTGYKVFQVRVNFVRDAQKQEAMWERQHEIAADKIFAMCSDLGGFFLKIAQILGKPDLAPSAWVKRLVTLCDRAPPTPFDAVKLVLENELGQGIHDVFDRFDVEPLGSASIAQVHRARLKGDNGDVVVKVQHPGIQDLMMTDIHNLQAFALYMQKTDIKFDLYSVTKEMEKQIGYEFDFMREADAMERIRKFLHQNNKKTPVLVPRVIRDMVTRRVLVMEYIDGIPIMNLGDEIAKRGINPRGKVAAAAKQKILQSLTLAYGQMILKSGFFHADPHPGNILICKGSEVALLDYGQVKDLPEQLRLGYANLVLAIANGDPLRAAESYRELGIETLSNCENEQQELFKLAETMFDTKLPPGVTMLQPFSEDSSIKKVGVMAFPEELFSVLRTVHLLRGLSVGLGINYSCAEQWRPLAEEALSRAGRFKGKDVKPRGSRKH 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g01750 472 Gene3D Transferase(Phosphotransferase) domain 1 130 343 - -
Cca11g01750 472 SMART serkin_6 134 401 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca11g01750 472 PANTHER - 9 469 - -
Cca11g01750 472 ProSiteProfiles Protein kinase domain profile. 134 472 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca11g01750 472 CDD ABC1_ADCK3-like 104 359 - -
Cca11g01750 472 Pfam ABC1 atypical kinase-like domain 104 358 IPR004147 -
Cca11g01750 472 PANTHER ABC1 FAMILY PROTEIN 9 469 - -
Cca11g01750 472 SUPERFAMILY Protein kinase-like (PK-like) 106 330 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g01750 Cca-Chr11 42121487 42130692 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g01750 K08869 - gmx:100813009 865.529
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca11g01750 11 42121487 42130692 Cca11g01750 11 42121487 42130692 ECH