Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g01725 ATGGGGATGGACGCACCCAATCCTTCTTCTTCCGGAGCTtctcctctcctcgccaatctcccctctcgaggcctcttctcttcctcCGTCGTTTCTTCCCATCCGGGTGGGATGCGGGTCTATGTATGTGATCATGATACCTCACCACCAGAAGGTCAACATATTAAGACAAACCAACAAAACATACTGATTAGATCACTGACCCTTAAGAAACAAAGGGGTGATTCGAGTTCAAAGGATGGATCTGATGGTTCAAGAAAGAGGTCTGCTGATAAGGGTTTGGATAGAGCTGCAGCCAAGAAAACAAATAATCAAACAAACTCCAGGCAAGAGGGATCAAACAGTCAAGCAACCACTAGGGACTTTCACAACCTGACTGTAGAGAGGCTTCGTGCTCTTTTGAAAGCTAAAGGTCTTTCAACCAAAGGAAAGAAGGAGGAGCTTATTACTCGTCTAAAAGATGCAACTGGTTAA 474 0.3987 MGMDAPNPSSSGASPLLANLPSRGLFSSSVVSSHPGGMRVYVCDHDTSPPEGQHIKTNQQNILIRSLTLKKQRGDSSSKDGSDGSRKRSADKGLDRAAAKKTNNQTNSRQEGSNSQATTRDFHNLTVERLRALLKAKGLSTKGKKEELITRLKDATG 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g01725 157 MobiDBLite consensus disorder prediction 72 98 - -
Cca11g01725 157 ProSiteProfiles SAP motif profile. 122 156 IPR003034 -
Cca11g01725 157 MobiDBLite consensus disorder prediction 139 157 - -
Cca11g01725 157 MobiDBLite consensus disorder prediction 52 71 - -
Cca11g01725 157 MobiDBLite consensus disorder prediction 41 123 - -
Cca11g01725 157 MobiDBLite consensus disorder prediction 137 157 - -
Cca11g01725 157 MobiDBLite consensus disorder prediction 7 21 - -
Cca11g01725 157 PANTHER DET1- AND DDB1-ASSOCIATED PROTEIN 1 4 155 - -
Cca11g01725 157 SMART sap_9 122 156 IPR003034 -
Cca11g01725 157 MobiDBLite consensus disorder prediction 99 123 - -
Cca11g01725 157 MobiDBLite consensus disorder prediction 1 21 - -
Cca11g01725 157 Pfam SAP domain 123 155 IPR003034 -
Cca11g01725 157 PANTHER DET1- AND DDB1-ASSOCIATED PROTEIN 1 4 155 IPR033575 GO:0032434
Cca11g01725 157 Gene3D SAP domain 98 156 IPR036361 -
Cca11g01725 157 Pfam Det1 complexing ubiquitin ligase 16 72 IPR018276 -
Cca11g01725 157 SUPERFAMILY SAP domain 117 154 IPR036361 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g01725 - - gmx:100817629 268.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca11g01725 11 41783350 41788451 Cca11g01725 11 41783350 41788451 ECH