Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g01721 atgaagatggaggttaagatgaaTCTGGTTCTGTTAATGGCGTGTTTGGCCAACTTCAACATCGTTTTTGCCTTTGCTCACATTCATGGTTTTGGGGAGCAACCACTCTCCGAGATTGCCATCCACAAAGCTGTTGTTTCACTCCACACTAGAGCTTCCATCACAGTCACCCCTTCTCTTCTCGGCATAAAGGGTGAGGATACCCAATGGGTGACAGTAGATATTGATTTCCCTGACCCTTCTGCAGATGATTGGGTTGGAGTTTTCTCTCCTGCTAAGTTCAATTCATCAACATGTCCACCTGTGAATGATCCAAAAGAAGTGGTTCCGTACATATGCTCAGCCCCAATTAAGTTCAAGTTTATGAATTACTCCAACTCACACTATACCAACACAGGAAAAGCTTCTTTGAAGTTCCAGTTGATCAATCAACGTGCAGATTTCTCCTTCGCGCTATTTTCGGGCGGACTATTAAATCCTAAGCTTGTGGCAGTTTCCAATTTCATATCATTTGCCAATCCTAAAGTGCCTCTATATCCACGCCTTGCTCAAGGGAAGTCTTGGGACGAAATGACAGTTACCTGGACTAGTGGATATGACATAAATGAAGCTACACCATTCATTGAGTGGGGTCTTAAGGGTAAAACGCAAGTGCAATCTCCTGCTGGGACGTTGACATTTGGTCGCAACAGCATGTGTGGCTCACCGGCACGAACTGTTGGTTGGCGTGACCCCGGTTTCATACACACAAGTTTTCTCAAAAATCTTTGGCCGAACTCAGTGTATACCTATCGATTAGGGCATCTATTGTCTAATGGTTCATATATTTGGAGCAAGAAATATTCATTCAAGTCATCACCTTATCCCGGACAGGACTCACTGCAACGTGTTATCATATTTGGTGATATGGGGAAGGCTGAGCGCGATGGTTCAAATGAGTATAATGCCTATCAACCTGGTTCACTTAACACCACTGATCAGCTCATCAAGGATTTAGAAAATATTGACATTGTTTTCCACATAGGAGATATAACTTATGCAAATGGATATCTCTCGCAATGGGACCAATTCACATCTCAAGTGGAACCAATTGCATCAACAGTGCCATATATGATTGCCAGTGGTAATCATGAACGTGATTGGCCCAACACAGGATCCTTTTATGGCACTACAGATTCAGGTGGTGAATGTGGAGTTTTGGCTCAGAACATGTTTTTCGTTCCAGCTGAAAACAGAGCAAACTTTTGGTATGCAACAGATTATGGCATGTTTCGCTTCTGCATAGCTGACACTGAACATGATTGGAGAGAAGGAACAGAACAATACAAATTCATTGAGCATTGTCTTGCAACAGTAGACAGACAGAAACAACCCTGGTTGATTTTTGCTGCTCACCGTGTGCTTGGATATTCATCTGATTTTTATTATGGGTTGGAGGGCTCATTTGAAGAGCCGATGGGAAGGGAAAGTTTGCAAAGACTTTGGCAGAAATATAAAGTAGATATTGCATTTTATGGCCATGTCCATAACTACGAAAGGACATGCCCCATTTATCAGAATCAATGTGTGAATGATGAAAAGTCTCACTATTCCGGCGTCGTGAATGGAACAATTCATGTTGTTGCTGGAGGAGCAGGAAGCCACTTGTCAAACTTCAGCCAAGCACCCCCCAAGTGGAGTCTTTTCAGAGACTACGACTTTGGCTTTGTCAAGTTGACAGCATTCAATCATTCATCCCTCCTCTTTGAATACAAGAAAAGCAGTGATGGAAAGGTCTATGATCATTTTACCATTTCAAGAGATTACAAAGATGTCTTAGCGTGTGTGCATGATGGCTGTGAAGCAACCACACTAGCGACTTGA 1863 0.423 MKMEVKMNLVLLMACLANFNIVFAFAHIHGFGEQPLSEIAIHKAVVSLHTRASITVTPSLLGIKGEDTQWVTVDIDFPDPSADDWVGVFSPAKFNSSTCPPVNDPKEVVPYICSAPIKFKFMNYSNSHYTNTGKASLKFQLINQRADFSFALFSGGLLNPKLVAVSNFISFANPKVPLYPRLAQGKSWDEMTVTWTSGYDINEATPFIEWGLKGKTQVQSPAGTLTFGRNSMCGSPARTVGWRDPGFIHTSFLKNLWPNSVYTYRLGHLLSNGSYIWSKKYSFKSSPYPGQDSLQRVIIFGDMGKAERDGSNEYNAYQPGSLNTTDQLIKDLENIDIVFHIGDITYANGYLSQWDQFTSQVEPIASTVPYMIASGNHERDWPNTGSFYGTTDSGGECGVLAQNMFFVPAENRANFWYATDYGMFRFCIADTEHDWREGTEQYKFIEHCLATVDRQKQPWLIFAAHRVLGYSSDFYYGLEGSFEEPMGRESLQRLWQKYKVDIAFYGHVHNYERTCPIYQNQCVNDEKSHYSGVVNGTIHVVAGGAGSHLSNFSQAPPKWSLFRDYDFGFVKLTAFNHSSLLFEYKKSSDGKVYDHFTISRDYKDVLACVHDGCEATTLAT 620
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g01721 620 Pfam Purple acid Phosphatase, N-terminal domain 182 284 IPR015914 GO:0003993|GO:0046872
Cca11g01721 620 SUPERFAMILY Metallo-dependent phosphatases 295 602 IPR029052 -
Cca11g01721 620 Gene3D - 177 289 - -
Cca11g01721 620 PANTHER PURPLE ACID PHOSPHATASE-RELATED 8 619 - -
Cca11g01721 620 CDD MPP_PAPs 295 600 IPR041792 -
Cca11g01721 620 Pfam Fn3-like domain from Purple Acid Phosphatase 54 173 IPR040974 -
Cca11g01721 620 SUPERFAMILY Purple acid phosphatase, N-terminal domain 154 287 IPR008963 GO:0003993|GO:0046872
Cca11g01721 620 Pfam Calcineurin-like phosphoesterase 296 511 IPR004843 GO:0016787
Cca11g01721 620 Pfam Iron/zinc purple acid phosphatase-like protein C 536 594 IPR025733 -
Cca11g01721 620 PANTHER PURPLE ACID PHOSPHATASE 8 619 - -
Cca11g01721 620 Gene3D - 290 604 IPR029052 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g01721 Cca-Chr11 41731653 41737543 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca11g01721 45 620 Miscellaneous Gene Families AT2G03450 29.747 5.64e-64 221
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g01721 K22390 - gmx:100814531 1180.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca11g01721 11 41731653 41737543 Cca11g01721 11 41731653 41737543 ECH