Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g01717 atgaagaagaagaagGTGCAATGGTTCTGGAGCTGGGTCATCGGTTCCGTCATCTTGAGGCTGATCCTCCTCTACTTTCCCAAAAACCTCAACCTCTCTTCTCGCCCCGAAGTCTCCACCCCCCTCACCAGCCTCCGTCGCCTTGCCGAGGGTTACTGGTTGAAGCAGTCATCGGTCTCACCCTATGCCGGATCAATGTACCATGGTTCTCCCTTGCTATTGACACTTCTCGGCCCGCTCACGGTTACAAGAGTTGAAGGACAACCTGATCATCTTTTATGCAGTTTGGTTTTTGTGATTGCAGATGTTATATGTGCAATGCTTATTCGTGCTGCTGGTGAAAAACTCCAGGTGGCATACAGTTCAAGATTACAATTCCTTGGTCTTCATAATTTGTCGGAGAATTCAGAGCTTCTTCCTTCAGGAGACTTTGCTGCTCTAGTATACTTATGGAATCCTTTCACAATAGTTGCATGTGTTGGTCTATCCACATCTGCAATTGAGAACTTGATGGTTGTGTTATCACTTTATGGAGCATGTTCACGACTAACTCCACTGGCAGCTTTTGGGTGGGTCATGGCTACACACTTGTCTCTGTACCCTGCAATCCTTATTATCCCAGTGATATTGTTATTGGGATATGGTCCTGATGCTCCTCCTAGGAAATTATTCTGGCAAAGGAAAAATCTTGACGTTGGCAATTCCACCTCAAGTGATAGTTGTTCAGAAGAGGAAGCAAAGAATCAGCTAAAGATGGCTCATGTATTCTCGTGGAGACTAGTTGTGCTTTTTCTGTTCTGGACTTTGCTGTGGTCATCCTATGTCTTAGTCCTTTGTGGCATTTATGTCCAACAGTATGGTGGTCTGCAGGAGTTGTTCAAAAGAACCTATGGCTTCATTCTTACCATACAAGATCTGTCTCCAAACATCGGTGTTTTGTGGTACTTCTTTGCAGAAGTTTTTGATTTTTTCAGAAATTTCTTCCTGATAGTATTTCATGGGAATATTCTATTGATGATAGCTCCATTAGCCTTGCGGCTTAATCACCGGCCATGCTTTCTAGCTTTTGTATATATTTTGATATCTTCTATGTTGAAGTCTTATCCTTCTGTTGGTGATTCAGCTCTGTATTTGGGTTTACTTGGTTTATTTGCTTATGAACTTAAAGATATGCAGTTTTCATTCTTCCTGTTTTCTGGTTATGTTGGGGTTTCTCTTCTTAGCCCCGTGATGCACAATTTATGGATATGGAGGGGTACCGGGAATGCAAATTTTTACTTTGCGACTGCAATTGCTTATGCGTGCTTCCAGATCATTCTGGTGGTTGAGAGTGTTAGCGCCATGCTCAATCATGACAGAATGCTCACAAAGCTATACACTGCAAAGCTTCAAAACGTCAAATCTTGA 1407 0.4236 MKKKKVQWFWSWVIGSVILRLILLYFPKNLNLSSRPEVSTPLTSLRRLAEGYWLKQSSVSPYAGSMYHGSPLLLTLLGPLTVTRVEGQPDHLLCSLVFVIADVICAMLIRAAGEKLQVAYSSRLQFLGLHNLSENSELLPSGDFAALVYLWNPFTIVACVGLSTSAIENLMVVLSLYGACSRLTPLAAFGWVMATHLSLYPAILIIPVILLLGYGPDAPPRKLFWQRKNLDVGNSTSSDSCSEEEAKNQLKMAHVFSWRLVVLFLFWTLLWSSYVLVLCGIYVQQYGGLQELFKRTYGFILTIQDLSPNIGVLWYFFAEVFDFFRNFFLIVFHGNILLMIAPLALRLNHRPCFLAFVYILISSMLKSYPSVGDSALYLGLLGLFAYELKDMQFSFFLFSGYVGVSLLSPVMHNLWIWRGTGNANFYFATAIAYACFQIILVVESVSAMLNHDRMLTKLYTAKLQNVKS 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g01717 468 Pfam GPI transamidase subunit PIG-U 16 433 - -
Cca11g01717 468 PANTHER GPI TRANSAMIDASE COMPONENT PIG-U 1 458 IPR009600 GO:0016021|GO:0016255|GO:0042765
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g01717 K05293 - gmx:100777192 855.899
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca11g01717 11 41637365 41643277 Cca11g01717 11 41637365 41643277 ECH