Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g01715 ATGGAGCTCGAACTGAAAGAGTTGCGGGCCGATCTTCAATCTCTCACCCAATCGCTTCCCGATCCATCTCACCATGCTTTGCTCCGCAAGATTCAATTGCGTGTCGAGGACCTTGCCAATCTTGCAGCGGCTGCACCTGTTCGACGCTCTAAAGTTGAGGATATGAGTGCTGAGGTTGTAGATAGCAATCCTTATAGTCGACTTATGGCGCTTCAGAGAATGGGTATTGTGGAGAACTATGAAAGAATACGCGATTTCTCCGTTGCCATAGTTGGAATAGGTGGTGTAGGAAGTGTTGCAGCTGAGATGCTAACTAGATGTGGTATAGGTCGACTTTTATTGTATGATTATGACAAAGTGGAGCTTGCAAACATGAATAGGTTGTTCTTTCGTCCAGATCAGGTTGGTATGACCAAGACTGATGCAGCTGTACAGACTCTTTCAGACATAAACCCTGATGTTGTACTTGAGAGCTATACACTGAATATCACCACCGTCACAGGTTTTGAAACCTTTATGTCAAGTTTGAAAAATAAGTCCTTTCGTCCAGATAAACAAGGGAGTGGTGTGGATCTGGTTTTAAGTTGTGTGGATAATTATGAAGCAAGAATGGCTGTTAACCAGGCTTGTAATGAGTTGAGCCAAACATGGATGGAGTCAGGTGTTTCTGAGGATGCTGTTTCTGGCCATATTCAATTACTTATTCCTGGTGAAACTGCCTGTTTTGCATGTGCACCTCCTCTGGTTGTTGCATCTGGGGTAGATGAACGTACACTCAAGCGTGAAGGGGTTTGTGCTGCGTCTTTACCCACCACTATGGGGGTTGTTGCTGGCCTTCTAGTTCAAAACACACTAAAATTATTGTTAGGCTTTGGACAAGTCTCTCCGTATTTGGGATATAATTCTCTTAAGGATTTTTTCCCAACAATGCAAATGAAGCCAAACCCTCAATGTTCAAATGTAGCTTGCTTGAAGAGACAGGAAGAGTACATGCTTGCAAAACCAGCAAGAGATGCTGCAGCCAAAGCAAAAATGGAAGCTGAAGCACCAACTGAGGAAGGGCCACTTCACCAAGATAATGAATGGAATATAAGTGTTGTTGATGATATTGAACTGGACATTCCGGATACCAGAAGTTCAGATGTTTTGCCGGAAGGTCTCACGCATGAACTTCCTACTGCAGACGAGTTTCATAAGGCAACTCTCGACGCTCCAGTAGTTGACAACGACGACCTTGAAGATCTTCGTAGGCAACTTGAAGCCATTAATTCTGCATAG 1278 0.4397 MELELKELRADLQSLTQSLPDPSHHALLRKIQLRVEDLANLAAAAPVRRSKVEDMSAEVVDSNPYSRLMALQRMGIVENYERIRDFSVAIVGIGGVGSVAAEMLTRCGIGRLLLYDYDKVELANMNRLFFRPDQVGMTKTDAAVQTLSDINPDVVLESYTLNITTVTGFETFMSSLKNKSFRPDKQGSGVDLVLSCVDNYEARMAVNQACNELSQTWMESGVSEDAVSGHIQLLIPGETACFACAPPLVVASGVDERTLKREGVCAASLPTTMGVVAGLLVQNTLKLLLGFGQVSPYLGYNSLKDFFPTMQMKPNPQCSNVACLKRQEEYMLAKPARDAAAKAKMEAEAPTEEGPLHQDNEWNISVVDDIELDIPDTRSSDVLPEGLTHELPTADEFHKATLDAPVVDNDDLEDLRRQLEAINSA 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g01715 425 PANTHER BNAANNG16230D PROTEIN 1 425 - -
Cca11g01715 425 CDD ThiF_MoeB_HesA_family 64 312 - -
Cca11g01715 425 PANTHER UBIQUITIN-ACTIVATING ENZYME E1 1 425 IPR045886 -
Cca11g01715 425 Pfam ThiF family 65 319 IPR000594 -
Cca11g01715 425 Gene3D - 82 344 - -
Cca11g01715 425 ProSitePatterns D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 88 116 IPR029752 -
Cca11g01715 425 SUPERFAMILY Activating enzymes of the ubiquitin-like proteins 60 324 IPR035985 GO:0008641
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g01715 Cca-Chr11 41608773 41613629 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca11g01715 60 175 EF-hand Containing Proteins AT2G30110 33.613 1.37e-08 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g01715 K12164 - gmx:100819760 775.778
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca11g01715 11 41608773 41613629 Cca11g01715 11 41608773 41613629 ECH