Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g01714 ATGAACACTCGCGAAGCCACTTTAGTGGTCACGGCAACTGCCATTGGCGCCTTGGCCTCTGCAATTGGTTTCCGCTTCTTCTACCGACCCCAGATGCACGCCAAATCCTCGCAAAACGGCACCGTTTCATCTCCTCGGGACCCTTTTGACCCCTCCAAGCGCAAAGAATATCTATCGTGGGATGACTATTTTATGGCAATTGCATTTTTGTCGGCTGAGAGGTCCAAAGATCCTAATAGGCAGGTGGGGGCTTGTTTGGTGAGTCAAGATGGTATAATTCTTGGAATTGGATATAACGGGTTTCCTAGAGGTTGTTCTGATGACAAGCTACCTTGGGCAAAGAAATCCAAGACTGGGAATCCTTTAGAGACAAAGTACCCATATGTTTGTCATGCAGAAGTAAATGCTATTCTTAACACTAATCATGCTTCTGCTGCTGGACAACGGCTATACGTGACCATGTTTCCGTGCAATGAATGTGCTAAGATCATAATCCAGTCAGGGGTTTCTGAAATAATTTATTTTGTGGAGAAGAGATTAAAAAATTCAGATATTGCGTATACTGCCTCTCACAAGCTACTTTCATTGGCTGGTGTAAAGGTCAGGAAACATCAACCACTGATGAATGAAATTCATCTGAAGTTTGAGGAGTGA 654 0.4404 MNTREATLVVTATAIGALASAIGFRFFYRPQMHAKSSQNGTVSSPRDPFDPSKRKEYLSWDDYFMAIAFLSAERSKDPNRQVGACLVSQDGIILGIGYNGFPRGCSDDKLPWAKKSKTGNPLETKYPYVCHAEVNAILNTNHASAAGQRLYVTMFPCNECAKIIIQSGVSEIIYFVEKRLKNSDIAYTASHKLLSLAGVKVRKHQPLMNEIHLKFEE 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g01714 217 PANTHER CYTIDINE/DEOXYCYTIDYLATE DEAMINASE FAMILY PROTEIN 1 217 - -
Cca11g01714 217 CDD deoxycytidylate_deaminase 61 174 IPR035105 -
Cca11g01714 217 ProSiteProfiles Cytidine and deoxycytidylate deaminases domain profile. 59 201 IPR002125 -
Cca11g01714 217 SUPERFAMILY Cytidine deaminase-like 61 206 IPR016193 GO:0003824
Cca11g01714 217 PANTHER DEOXYCYTIDYLATE DEAMINASE-RELATED 1 217 IPR015517 -
Cca11g01714 217 Pfam Cytidine and deoxycytidylate deaminase zinc-binding region 59 175 IPR002125 -
Cca11g01714 217 ProSitePatterns Cytidine and deoxycytidylate deaminases zinc-binding region signature. 131 164 IPR016192 GO:0008270|GO:0016787
Cca11g01714 217 Gene3D Cytidine Deaminase, domain 2 51 217 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g01714 K01493 - gmx:100792003 415.616
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca11g01714 11 41604502 41607402 Cca11g01714 11 41604502 41607402 ECH