Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g01695 ATGATCGTTGGGTTTCATCTTTATATAATTAGGAAGAAGGGTCGTTTCATCATTTTAAGTTCTTGCTTTACTTCTGTGCCTCACAACTCACTTCCAATGGCTCTTTGGTGCTGGAACCTGCTTTTTCTTTCTCTTCCTGCGATCCTCTTCTCAACTCAACCTTGTGCTTATTCCCAACAAGTTCCGAAGTACAGATTCATGCAGAATGCGACGAGGGCAGCAGAGATCTCATACTACGACTACATCGTGATTGGCGGAGGCACCGCGGGGTGTCCTTTAGCCGCTACACTGTCTGAACATTACAGCGTGTTGCTGCTGGAACGCGGTGGGTCCCCCTACGGCAACCCCAACATCAGCAACTTAGCTTCTTTCGGCGCCGCCCTCTCCGACACCTCCCCCACCTCTCCCTCGCAGCGCTTCATCTCCCAAGACGGCGTCATCAACTCAAGAGCCCGCGTCCTCGGCGGCGGAAGCTGCTTGAACGCTGGCTTCTACACTCGCGCCAGCCCTCAATATGTCAAGGAAGCCGGCTGGGATGGAAAGACAGTGAATGAGTCGTACCAATGGGTAGAGAAGGTAGTGGCGTTCCAGCCAGAGGTGAAGCAGTGGCAATCCGCTGTCAGGGATGGGCTTCTCGAGATAGGTGTAGTGCCTAGTAATGGCTTCACTTATGATCATATTCATGGGACTAAGGTAGGGGGCACTATCTTCGACCACAATGGCAACAGGCACACCGCTGCTGATCTTCTCCAATATGCCAACCCCTCTCGAATCACTCTGCTTCTGGACGCCACCGTGCACAGGATCCTCTTTAGAGTCAAACCTGGTTCAAGGCCCAAGGCCCATGGAGTCGTCTTCAGGGACTCGCTTGGCCGTAGACACAAAGCCTACCTCAACAACCACCCGAGGAACGAGATCATTGTTTCGGCGGGTGCTCTCGGAAGCCCACAGCTCCTAATGTTGAGCGGAGTTGGGCCCGCGGACCACCTCCAGGCCCATAAAATCAAAATAACATTGGACCAGCCATGGGTGGGACAGGAAATGTCGGATAACCCAATGAACGCGATCTTCGTCCCATCCCCTGTCCCCGTAGAGGTGTCTCTCATTGAGGTTGTCGGAATAACAGATTTCGGCAGTTACATCGAAGCCGCCAGCGGGGAAAATTTCGCCGGTGGGTCCCCGCGTGACTACGGGATGTTCTCCCCCAAGATAGGGCAACTCTCGACGGTGCCCCCAAAGCAAAGGACCCCAGAGGCCCTCGCTAAGGCCACTGAATTGATGAACAATCTCGACGAAGCAGCCTTCCGAGGCGGATTCATCTTGGAGAAAATCATGGGGCCCATTTCAAGAGGACACTTGGAGCTCCGAAGCCGCGACCCGAACGACAACCCGTTAGTGACGTTCAACTACTTCCAGGACCCGCGAGACTTGGAGCGATGCGTGAAGGGCCTGACCACCGTGGAGAAGATAATCGAATCGAAGGCGTTCTCTAAGTTCAGATACCAAAACATGCCACTCCCCATGCTTCTCAACATGACCGCCAGTTCACCCGTTAACTTGTTACCCAAACACACCAATTCCTCCTTGTCTTTGGAACAGTTCTGCAGAGACACTGTGATGACCATTTGGCATTACCACGGAGGCTGCCAAGTTGGGAAGGTTCTCGATGCCGACTACAAGGTTCTCGGTGCGGACGCTCTGCGTGTGATTGATGGCTCCACCTTTAACTATTCCCCTGGGACTAATCCTCAGGCCACTGTTATGATGCTTGGCAGGTATATGGGAGTCAAGATATTGAGTCAGAGACTTCGCGCGGAGCAAATACAGCAATAA 1833 0.5319 MIVGFHLYIIRKKGRFIILSSCFTSVPHNSLPMALWCWNLLFLSLPAILFSTQPCAYSQQVPKYRFMQNATRAAEISYYDYIVIGGGTAGCPLAATLSEHYSVLLLERGGSPYGNPNISNLASFGAALSDTSPTSPSQRFISQDGVINSRARVLGGGSCLNAGFYTRASPQYVKEAGWDGKTVNESYQWVEKVVAFQPEVKQWQSAVRDGLLEIGVVPSNGFTYDHIHGTKVGGTIFDHNGNRHTAADLLQYANPSRITLLLDATVHRILFRVKPGSRPKAHGVVFRDSLGRRHKAYLNNHPRNEIIVSAGALGSPQLLMLSGVGPADHLQAHKIKITLDQPWVGQEMSDNPMNAIFVPSPVPVEVSLIEVVGITDFGSYIEAASGENFAGGSPRDYGMFSPKIGQLSTVPPKQRTPEALAKATELMNNLDEAAFRGGFILEKIMGPISRGHLELRSRDPNDNPLVTFNYFQDPRDLERCVKGLTTVEKIIESKAFSKFRYQNMPLPMLLNMTASSPVNLLPKHTNSSLSLEQFCRDTVMTIWHYHGGCQVGKVLDADYKVLGADALRVIDGSTFNYSPGTNPQATVMMLGRYMGVKILSQRLRAEQIQQ 610
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g01695 610 Gene3D - 196 541 - -
Cca11g01695 610 Gene3D - 79 591 IPR036188 -
Cca11g01695 610 Pfam GMC oxidoreductase 447 592 IPR007867 GO:0016614
Cca11g01695 610 PANTHER OSJNBA0019K04.7 PROTEIN 43 603 - -
Cca11g01695 610 PIRSF Alcohol_oxidase 56 609 IPR012132 GO:0050660
Cca11g01695 610 SUPERFAMILY FAD/NAD(P)-binding domain 78 600 IPR036188 -
Cca11g01695 610 Pfam GMC oxidoreductase 79 352 IPR000172 GO:0016614|GO:0050660
Cca11g01695 610 SUPERFAMILY FAD-linked reductases, C-terminal domain 348 548 - -
Cca11g01695 610 ProSitePatterns GMC oxidoreductases signature 2. 311 325 IPR000172 GO:0016614|GO:0050660
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g01695 Cca-Chr11 41300963 41307018 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca11g01695 35 602 Miscellaneous Gene Families AT5G51950 57.666 0.0 658
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g01695 - - gmx:100796752 999.964
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca11g01695 11 41300963 41307018 Cca11g01695 11 41300963 41307018 ECH