Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g01694 ATGCACCCATCTCGTGCTGAAGCATCATCACAACCCTGCTTTAATGGTTGTTTCCCGTCTCCAATTCTTGCTTCTGAGAGGTACCATAGTGCTACTTCCAAGCCTAGAGTCAACAACGTAGCTTCATCAAACGATGGGTTCGCCGCAGCCACATCTTCCACCCTTCCACACACACATTTCACAAACCACGAGTCCCTTCCAAATGTGCACGATTCATACACCAGCTTCACCAAGGCATTCCCTCAATTTTCCACAACTTCTGAAGTGGATCAAATTCGAGCCCAAGAATACCATCACTTGAACCACTCCAACACGGGCTTCGATTACACGGGATATGGCCTTTTCTCCTATGCTCAGCAACAAAGATGTTCCCCCGCGATTGcttcttcttcttcttcatcatcatcatcATTGCCCTGCTTAACATCCGACGCATCCTTCTTTGATGTGTCCTACAAGTCGGTGAGCTTGCAGTCACAGGCTCTCTACGGTGGGCACGAGTCAGAACTAGAATCAAGAATGAGAAAGAGAATCATGTCGTTCATGAATGTCTCAGAAGCTGAATACACCCTTGTTTTCATTGCTAACGAGGTATCTGCCTTTAAAATTGTAGCTGATTCTTTCCAATTTCAATCCAAAGGACAGATCCTCACAGTGTATGACCATAGCAGCGAGGCACTGGATGTGATGATTGAGAGTTGCAAGAAGCAAGGGGTGCATGTCTTGTCAGCAGAATTCACCTGGCCTAGTCTGAGACTCGAGTGGAGGAAACTAAAGAAGATGATAATGAACAAAAGGGCAAAGAGAAAGAATGGTCTATTTGTTTTTCCACTTCATTCAAGGGTAACAGGAGCACCATATTCCTATGTTTGGATGTCCATGGCACAGGAAAATGGGTGGCGCGTCTTGCTTGATGTGTGCGCATTGAAACCTAAGGAAATGGGAACCTTGGGTATGTCTCTTTTTAAGCCTGATTTCATGGTTTGTTCGTTTTACAAAGTCTTCGGAGAAAACCCATCAGGTTTTGGGTGCTTGTTTGTGAAAAAATCTAGTGTCTCTTCTTTGAAAGATCCGGGGAACGCTACAAGCATAGGAATCATAACCCTTATCCCAGCGTTTAGACAATCTCATCAtgacactgaagacgtagtaactgaaactgaaacggaaCAGGAAGTGTTTGCAAAGCTAGATGGGGCATCATCAACATCAGAAATTGAGGAGTTGAGCATATCCTTTGACTCATCTAAAGATAGAAACATATTAGGTAGTACTAAAAATGAAGGCTTAGAGATTGATTGTAGGGGATTAGACCATGCAGACTCGGTGGGGTTATTAGTGATTAATAGCAGAACCAAGTATTTGGTTAATTGGTTGGTTAATGCATTAATGAGTCTTAAGCATCCACATCATGAAAATAGGCTTTCGCTAATTAGGATTTATGGACCCAAGGTAAGTTCTTTTCGTGGACCCGCCATTGCATTTAATATATTTGACTGGAAGGGAGAAAAAGTTGATCCCGCGCTTGTGCAGAAGCTTGCTGATAGGAACAACATCTCTTTAAGTAGCTCGTTTTTGAGAAATTTAAGGTTCTCAGACAAGAATGAAGAGGAAACTCATTGGGCCTTAGAAACAAGAGCGTCTGAGGTTCAAGGGTTGGGCCTGTCCAAGAAGACACGTAGGGAAGAGTCTGGGATTTTTGTCGTCACAGCTGCACTGGGCCTCGTGACAAACTTCGAAGATGTTTACCGATTATGGGCTTTCCTTTCGAGGTTCCTGGATGCAGATTTTGTGGAGAAAGAGAAATGGAGGTACATGGCTCTAAATCAAAACACTATCGAAGTATGA 1848 0.421 MHPSRAEASSQPCFNGCFPSPILASERYHSATSKPRVNNVASSNDGFAAATSSTLPHTHFTNHESLPNVHDSYTSFTKAFPQFSTTSEVDQIRAQEYHHLNHSNTGFDYTGYGLFSYAQQQRCSPAIASSSSSSSSSLPCLTSDASFFDVSYKSVSLQSQALYGGHESELESRMRKRIMSFMNVSEAEYTLVFIANEVSAFKIVADSFQFQSKGQILTVYDHSSEALDVMIESCKKQGVHVLSAEFTWPSLRLEWRKLKKMIMNKRAKRKNGLFVFPLHSRVTGAPYSYVWMSMAQENGWRVLLDVCALKPKEMGTLGMSLFKPDFMVCSFYKVFGENPSGFGCLFVKKSSVSSLKDPGNATSIGIITLIPAFRQSHHDTEDVVTETETEQEVFAKLDGASSTSEIEELSISFDSSKDRNILGSTKNEGLEIDCRGLDHADSVGLLVINSRTKYLVNWLVNALMSLKHPHHENRLSLIRIYGPKVSSFRGPAIAFNIFDWKGEKVDPALVQKLADRNNISLSSSFLRNLRFSDKNEEETHWALETRASEVQGLGLSKKTRREESGIFVVTAALGLVTNFEDVYRLWAFLSRFLDADFVEKEKWRYMALNQNTIEV 615
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g01694 615 PANTHER MOLYBDOPTERIN COFACTOR SULFURASE MOSC 7 615 - -
Cca11g01694 615 PANTHER MOLYBDENUM COFACTOR SULFURASE-LIKE PROTEIN 7 615 - -
Cca11g01694 615 SUPERFAMILY PLP-dependent transferases 162 594 IPR015424 -
Cca11g01694 615 Gene3D - 152 386 IPR015421 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g01694 Cca-Chr11 41290649 41293577 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g01694 - - gmx:100796219 965.296
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca11g01694 11 41290649 41293577 Cca11g01694 11 41290649 41293577 ECH