Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g01639 ATGGCTTCTTTCACACCTCTCTTCTTCTTCCTCATCAACCTCTCCTTGCTTCTCGCCCTCTCTTCCGCTGCGGATCCATTCGTTTCCTACCAATTTGAGGTCTCTTACATCACCGCCTCCCCTCTCGGAGTTCCTCAGCAGGTCATTGCTATCAACAACAAGTTTCCAGGGCCTACTATCAATGTAACCACAAACAACAACGTTGTTGTCAATGTTCGGAACAAGTTGGACGAGAGCCTCCTCATTCATTGGTCTGGAATTCAGCAAAGGAGGAGTTCGTGGCAGGATGGTGTTCTTGGCACAAACTGTCCCATTCCTGCTAAGTGGAACTGGACTTACCAGTTTCAGGTGAAGGATCAGATTGGAAGCTTTTTCTACTTCCCTTCTCTTCATTTTCAGAGAGCTGCTGGTGGATTTGGGGGTTTCATCATAAACAACCGACCCATCATTCCTATTCCTTTTGATACCCCACATGGGGACATTGTCGTTTTCATTGGAGATTGGTACACCCGCAATCATACGGATTTGAGGAAGGCCCTTGATGACGGGAAAGATCTTGGCATGCCAGATGGTGTTCTCATCAACGGAAAAGGTCCTTACCGATATAACGATACCCTTGTTCCTGAAGGCATTGATTATGAAACAATTGAAGTCCACCCCGGAAAAACTTACCGACTTCGTGTACATAATGTTGGAGTATCTACCAGTCTCAATTTCAGGATCCAGAGTCATAACTTACTTCTAGCAGAGACAGAGGGGTCTTACACAGTGCAACAGAACTACACTAGCTTAGATATTCATGTTGGACAATCTTATTCTTTCCTTGTAACCATGGACCAGAATGCTAGTACAGATTACTACATTGTAGCAAGTGCCAGGTTTGTGAATGAATCACGTTGGCAAAAAGTTACTGGAGTTGGTATCTTGCGCTATACAAATTCCAAGGGGAAGGCACGTGGTCCTCTCCCACCGGCTCCTGATGATCAATTTGACAAAACTTACTCAATGAACCAAGCAAGATCCATCAGATGGAATGTATCAGCAAGTGGTGCTCGTCCTAACCCACAAGGGTCTTTTAGATATGGTTCCATCAACGTGACTGAGATTTATGTATTAAAAAATAAGCCACCAGAGAAAATCAATGGGAAGCGGCGAGCAACACTCAGTGGAATCTCATTTGTCAATCCTTCCACTCCAATCAGGCTTGCTGACCAGTACAAGTTAAAGGGTGTATACAAGCCTGATTTCCCCACCAAGCCTCTTACCGGATCACCTCGTGCAGCAACATCAGTCATTAATGGATCTTATAGAGGATTTATGGAAGTTATACTTCAGAACAATGATACCAAGATGCATACCTATCACATGAGTGGATATGCATTTTTTGTAGTCGGGATGGATTATGGTGATTGGTCTGATAATAGCAGGGGCACATATAACAAGTGGGATGGAATAGCTCGCACTACAACACAGGTTTATCCTGGAGCATGGACAGCAATTTTGGTTTCCCTGGACAACGTAGGAGTGTGGAATCTCAGAACAGAAAACCTTGATTCATGGTATCTTGGTCAAGAAACATATGTCAGGGTTGTCAACCCAGAGGTTACTAACAAGACTGAACTGCCCATTCCAGACAATGCCCTTTTCTGTGGTGCCCTTAGTAAATTGCAGAAGCCTCAAGATATTTCTTCAGATGCACCATCAATCAGTGGGAATAGCCTGAAGCTGTTCTTCACCTGGCTGATTGTGTGTGCCTGGATCCACATTTTCCAGTGA 1776 0.4443 MASFTPLFFFLINLSLLLALSSAADPFVSYQFEVSYITASPLGVPQQVIAINNKFPGPTINVTTNNNVVVNVRNKLDESLLIHWSGIQQRRSSWQDGVLGTNCPIPAKWNWTYQFQVKDQIGSFFYFPSLHFQRAAGGFGGFIINNRPIIPIPFDTPHGDIVVFIGDWYTRNHTDLRKALDDGKDLGMPDGVLINGKGPYRYNDTLVPEGIDYETIEVHPGKTYRLRVHNVGVSTSLNFRIQSHNLLLAETEGSYTVQQNYTSLDIHVGQSYSFLVTMDQNASTDYYIVASARFVNESRWQKVTGVGILRYTNSKGKARGPLPPAPDDQFDKTYSMNQARSIRWNVSASGARPNPQGSFRYGSINVTEIYVLKNKPPEKINGKRRATLSGISFVNPSTPIRLADQYKLKGVYKPDFPTKPLTGSPRAATSVINGSYRGFMEVILQNNDTKMHTYHMSGYAFFVVGMDYGDWSDNSRGTYNKWDGIARTTTQVYPGAWTAILVSLDNVGVWNLRTENLDSWYLGQETYVRVVNPEVTNKTELPIPDNALFCGALSKLQKPQDISSDAPSISGNSLKLFFTWLIVCAWIHIFQ 591
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g01639 591 Gene3D - 363 561 IPR008972 -
Cca11g01639 591 PANTHER MULTI-COPPER OXIDASE 12 562 IPR045087 -
Cca11g01639 591 PANTHER MONOCOPPER OXIDASE-LIKE PROTEIN SKS1 12 562 - -
Cca11g01639 591 Pfam Multicopper oxidase 161 313 IPR001117 -
Cca11g01639 591 SUPERFAMILY Cupredoxins 156 353 IPR008972 -
Cca11g01639 591 Pfam Multicopper oxidase 400 533 IPR011706 GO:0005507|GO:0016491
Cca11g01639 591 SUPERFAMILY Cupredoxins 23 174 IPR008972 -
Cca11g01639 591 Gene3D - 158 351 IPR008972 -
Cca11g01639 591 Gene3D - 20 146 IPR008972 -
Cca11g01639 591 SUPERFAMILY Cupredoxins 378 551 IPR008972 -
Cca11g01639 591 Pfam Multicopper oxidase 34 147 IPR011707 GO:0005507
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g01639 Cca-Chr11 40306953 40310700 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g01639 - - gmx:100788318 1092.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca11g01639 11 40306953 40310700 Cca11g01639 11 40306953 40310700 ECH