Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g01629 ATGAAGTCTTCTAGATCTTCAACACTTGCTCTCTTTTTTACAATCAATTTGCTTTTCTTTGTCATGGCAAGTGGCTGCTTCACTTGTACACAACCTAAGCCAACGCCTAACACATTTCCTTTCCCAAACCCTAGTCCTGCCACGAAGAGTTGTCCTAGGGACGCACTTAAGTTAGGAGTGTGTGCCAACGTGCTTAATGGACCAATTGGTGCAGTGGTGGGGTCACCACCGGACCACCCATGTTGCTCGGTGCTGGAAGGACTTCTTGATCTTGAAGTTGCGGTTTGTCTCTGCACTGCCATCAAAGCTAACATACTTGGCATTAACCTTAACATCCCCATTTCTCTTAGCTTGATCCTGAACGCCTGCGAGAAGAGTCCACCCTCTGACTTCCTGTGCAACTAG 405 0.4741 MKSSRSSTLALFFTINLLFFVMASGCFTCTQPKPTPNTFPFPNPSPATKSCPRDALKLGVCANVLNGPIGAVVGSPPDHPCCSVLEGLLDLEVAVCLCTAIKANILGINLNIPISLSLILNACEKSPPSDFLCN 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g01629 134 CDD HPS_like 48 133 IPR027923 -
Cca11g01629 134 PANTHER BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN 6 133 - -
Cca11g01629 134 Gene3D - 48 134 IPR036312 -
Cca11g01629 134 PANTHER - 6 133 - -
Cca11g01629 134 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 53 133 IPR036312 -
Cca11g01629 134 Pfam Hydrophobic seed protein 51 133 IPR027923 -
Cca11g01629 134 SMART aai_6 51 133 IPR016140 -
Cca11g01629 134 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 26 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g01629 Cca-Chr11 40079611 40080598 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca11g01629 2 133 Acyl Lipid Metabolism Gene Families AT4G22520 31.061 4.89e-12 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g01629 - - gmx:100527818 222.246
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca11g01629 11 40079611 40080598 Cca11g01629 11 40079611 40080598 ECH