Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g01627 ATGGGTTCCAAAACTTGCTCTTCCCTTGCTCTTTTCCTCACACTCAACCTCCTCTTCTTTGCCCTTGTCTCTTCTTGCGGGACCTGCCCTAGCCCAAAGCCAAAGCCAAGGCATCACAAGCATGTCAAGCCAAGCCCTTCAGGTGGATCTGGCGGTTCAGGTGGTTCAGGTGGCTCGGGAGGTTCAGGTGGCTCGGGAGGCTCAGGTGGCTCTGGTGGTTCAGGTGGCTCGGGTGGTTCTGGTACTTCATGCCCCCGTGATGCACTCAAACTAGGTGTATGTGCCAATGTGTTAAACGGGTTGCTAAACGTGACTTTGGGTCAACCACCAGTTGCCCCTTGTTGCTCCCTCCTTAACGGTCTAGTTGATCTTGAGGCTGCAGTGTGCCTTTGCACTGCCCTCAAAGCTAACATTTTGGGCATCAACCTCAACCTTCCCATCTCACTCAGCTTGCTTCTTAATGTTTGCTCAATGCAAGCCCCACGCGACTTCCAATGTGCCTAA 504 0.5317 MGSKTCSSLALFLTLNLLFFALVSSCGTCPSPKPKPRHHKHVKPSPSGGSGGSGGSGGSGGSGGSGGSGGSGGSGGSGGSGTSCPRDALKLGVCANVLNGLLNVTLGQPPVAPCCSLLNGLVDLEAAVCLCTALKANILGINLNLPISLSLLLNVCSMQAPRDFQCA 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g01627 167 PANTHER - 7 47 - -
Cca11g01627 167 PANTHER - 78 167 - -
Cca11g01627 167 MobiDBLite consensus disorder prediction 32 79 - -
Cca11g01627 167 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 26 - -
Cca11g01627 167 Pfam Hydrophobic seed protein 84 167 IPR027923 -
Cca11g01627 167 MobiDBLite consensus disorder prediction 49 79 - -
Cca11g01627 167 Gene3D - 82 167 IPR036312 -
Cca11g01627 167 CDD HPS_like 82 166 IPR027923 -
Cca11g01627 167 PANTHER 14 KDA PROLINE-RICH PROTEIN DC2.15 78 167 - -
Cca11g01627 167 PANTHER 14 KDA PROLINE-RICH PROTEIN DC2.15 7 47 - -
Cca11g01627 167 SMART aai_6 84 166 IPR016140 -
Cca11g01627 167 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 86 166 IPR036312 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g01627 Cca-Chr11 40034886 40035724 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca11g01627 83 166 Acyl Lipid Metabolism Gene Families AT4G22490 40.476 4.50e-13 60.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g01627 - - gmx:100499716 189.119
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca11g01627 11 40034886 40035724 Cca11g01627 11 40034886 40035724 ECH