Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g01624 ATGTCCTCGAAATCAAAAGCTAAAGCTATGTTCTTCATCTTTAAAATATTAATGTTAAACGCTTTGGCACCAATATATGCATGTGGTCCCTGCACTCCGCCACGTCATCACAAACGGCCACCGCATCATGGAGGAGGCCGGCCAAAAGTGTCCCCTCCTCTGCCGCCGATCATAATCAACCCTCCATCGGTACCCCCTCCGGTGGTGATATACCCTCCACCAGCCTCGCCCTCACCGTACCCGCCGCCGCACGGTGGTGGTCCTCCTCATCAACGCACTTGCCCAATTGATGCCCTAAAATTGGGACTTTGCTTGGACGTGCTTGGAGGATTGGTGCATGTGGGAATAGGGGACCCAATCGAGAACGTGTGCTGTCCCGTTATACAAGGGTTGCTTGATCTTGAAGCTGCGATTTGTCTTTGCACCGTTATTAGGGCTAAGCTTCTTAACCTTAATATCTTCATTCCTCTTGCACTTCAAGTCTTGATCACTTGCGGGAAGACTCCTCCTCCTGGTTTTGTTTGTCCTCCTCTGTGA 537 0.5065 MSSKSKAKAMFFIFKILMLNALAPIYACGPCTPPRHHKRPPHHGGGRPKVSPPLPPIIINPPSVPPPVVIYPPPASPSPYPPPHGGGPPHQRTCPIDALKLGLCLDVLGGLVHVGIGDPIENVCCPVIQGLLDLEAAICLCTVIRAKLLNLNIFIPLALQVLITCGKTPPPGFVCPPL 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g01624 178 CDD HPS_like 93 175 IPR027923 -
Cca11g01624 178 PANTHER BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN 5 177 - -
Cca11g01624 178 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 96 177 IPR036312 -
Cca11g01624 178 Gene3D - 92 177 IPR036312 -
Cca11g01624 178 SMART aai_6 94 175 IPR016140 -
Cca11g01624 178 Pfam Hydrophobic seed protein 93 176 IPR027923 -
Cca11g01624 178 PANTHER - 5 177 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g01624 Cca-Chr11 39974067 39975123 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca11g01624 78 177 Acyl Lipid Metabolism Gene Families AT4G22490 35.000 3.88e-11 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g01624 - - gmx:100807391 228.409
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca11g01624 11 39974067 39975123 Cca11g01624 11 39974067 39975123 ECH