Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g01619 ATGGCAGGGAGATTGACGAACGCAGCATCGAGGATCTTGGGCGGAAACGGCGTCGTTTGCCGATCTGTAGCCTCCTCTCTTCGCCTTCGCTCCGGCATGGGCCTCCCCGTCGGCAAACATTATGTTCCCGACAAACCTCTTCCCATGAATGACGAACTTGTGTGGGACAACGGCACTCCATTTCCCGAACCGTGCATAGATCGTATTGCTGACACCGTCGGAAAGTATGAAGCATTGGCCTGGCTGTGTGGGGGCTTGAGTTTTTTTGCGTCTCTGGGTTTATTGGCTGTGTGGAATGACAAAGCCTCCAAGATACCGTTTGCACCCAAAGTATATCCATATGACAATCTGCGAGTGGAGCTTGGTGGTGAACCATAG 378 0.5265 MAGRLTNAASRILGGNGVVCRSVASSLRLRSGMGLPVGKHYVPDKPLPMNDELVWDNGTPFPEPCIDRIADTVGKYEALAWLCGGLSFFASLGLLAVWNDKASKIPFAPKVYPYDNLRVELGGEP 125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g01619 125 PANTHER NADH DEHYDROGENASE [UBIQUINONE] 1 BETA SUBCOMPLEX SUBUNIT 8, MITOCHONDRIAL 1 125 IPR038863 -
Cca11g01619 125 PANTHER BNAC02G33360D PROTEIN 1 125 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g01619 Cca-Chr11 39926323 39931158 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g01619 - - pvu:PHAVU_001G061600g 238.039
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca11g01619 11 39926323 39931158 Cca11g01619 11 39926323 39931158 ECH