Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g01601 ATGGCCGACTCCTCTCAAGACCTCGACCAACTCCTCGACAGTGCTTTGGATGATTTCCAAACCTTCAACCTCAATCCTTCTCTGCCAAGTGGGGAAGCGACGGAGAAGAAGAAGGAGCGTCCTTCGTTGCCGTTGGGGGTTCAGGGATTGGGCATGGGGTTACCTGATTTGGGAACGAAGAAGAAGGGGAAGCAGAAGGCTTCCAAAGATAGCCACGTGTCGGAGGCGCTGAACAAGCTGAGGGAGCAGACCAGAGAGGCTGTCAAGGGACTCGAGTCCATGGCCCCACCCTCTGTCGATGATTTGGGCAAGGATGCTCTCATGGAGGATTGGGTCAAACAGTTTGAGCAGCTTGCTGGCTCTCAGGACATGGAATCTATTGTGGAGACCATGATGCAGCAACTTCTGTCCAAGGAAATTCTTCATGAACCAATGAAGGAAATAGCTGAAAAATATCCCAAGTGGTTGGAAGAGCACAAAACCAGCTTAAGCAAAGAAGAATATGAACGCTATTCACACCAATATGAACTGATACGAAATCTTAATGAAGTTTACGAAAATGATTCCGGAAACTTCACCAAGATTGTTGAGCTCATGCAGAAAATGCAAGAATGTGGACAACCACCAAATGATATTGTCAAGGAGCTTGCTCCTGATTTCGATCTAGCCAGTCTTGGCCAGTTATCTCCAGAGATGTTTGATTCTCAGCCAAATTGTTGTATAATGTGA 729 0.4705 MADSSQDLDQLLDSALDDFQTFNLNPSLPSGEATEKKKERPSLPLGVQGLGMGLPDLGTKKKGKQKASKDSHVSEALNKLREQTREAVKGLESMAPPSVDDLGKDALMEDWVKQFEQLAGSQDMESIVETMMQQLLSKEILHEPMKEIAEKYPKWLEEHKTSLSKEEYERYSHQYELIRNLNEVYENDSGNFTKIVELMQKMQECGQPPNDIVKELAPDFDLASLGQLSPEMFDSQPNCCIM 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g01601 242 Pfam Pex19 protein family 62 242 IPR006708 GO:0005777
Cca11g01601 242 PANTHER PEROXISOMAL BIOGENESIS FACTOR 19 2 242 IPR006708 GO:0005777
Cca11g01601 242 MobiDBLite consensus disorder prediction 59 74 - -
Cca11g01601 242 MobiDBLite consensus disorder prediction 21 74 - -
Cca11g01601 242 PANTHER PEROXISOME BIOGENESIS PROTEIN 19-1 2 242 - -
Cca11g01601 242 Gene3D Pex19, mPTS binding domain 112 225 IPR038322 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g01601 K13337 - gmx:100527390 414.075
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca11g01601 11 39773006 39776707 Cca11g01601 11 39773006 39776707 ECH