Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g01514 ATGAAATTCTCCTCATACCTAGTGATTTTCTTTACCATTTTCTTTCGATGCTCAAATGGCTCCAATCTTGTTATAACTCAATCTTGCATGGAGGCCTCCGAGATTAGTCCAAATGTGAGGTATGATTTTTGTGTTGCATCCCTTGAAGATGCTTCTTCAAAGTGGCAACCACCACCCACCAAACTCGAAGATCTTGTGGGCATATCAATTCAGCTAAGCAAATCCAATGCAACCAACATGGTTTCCATCATTTCGGAGCTCTTGAAGAACAAAGGTTATGATCCATACGCGAAGGGTTGCCTAAGAGATTGCTTTGATCTTTACAAGGATTCCCTTTCAGATTTAGATGATGTTGTGGCTGCTTTCAAGTCCAAGGATTTGGACACTGCTGCTATAAAACTCAGCGCAACCTTGGATAGCTCGGTTACATGTGAAGATCAGTTCAAAGATAAGAAAGGTGTGAGGCTAAATTACAGTTAA 480 0.4083 MKFSSYLVIFFTIFFRCSNGSNLVITQSCMEASEISPNVRYDFCVASLEDASSKWQPPPTKLEDLVGISIQLSKSNATNMVSIISELLKNKGYDPYAKGCLRDCFDLYKDSLSDLDDVVAAFKSKDLDTAAIKLSATLDSSVTCEDQFKDKKGVRLNYS 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g01514 159 Gene3D Invertase/pectin methylesterase inhibitor family protein 21 157 IPR035513 -
Cca11g01514 159 CDD PMEI-Pla_a_1_like 29 154 IPR034088 -
Cca11g01514 159 Pfam Plant invertase/pectin methylesterase inhibitor 25 152 IPR006501 GO:0004857
Cca11g01514 159 TIGRFAM PME_inhib: pectinesterase inhibitor domain 6 153 IPR006501 GO:0004857
Cca11g01514 159 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 29 - -
Cca11g01514 159 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 36 153 IPR035513 -
Cca11g01514 159 SMART PMEI_2 20 159 IPR006501 GO:0004857
Cca11g01514 159 PANTHER PLANT INVERTASE/PECTIN METHYLESTERASE INHIBITOR 2 153 - -
Cca11g01514 159 PANTHER PECTINESTERASE 2 153 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g01514 - - gmx:102666746 219.935
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca11g01514 11 38139127 38140053 Cca11g01514 11 38139127 38140053 ECH