Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g01187 ATGGTGAACCTAGTGGCGGCACAGAAGCCATTGCTTCACGGGCTAATGAAGATGGCCGGGATCAGGCCCTACACGGTGGAGATAGAGCCCGGCACCGTCATGAGCTTCTGGGTCCCCTCGGAGACCATAACCAAGCCCAACAAAAAAGACGAGAAGCCCAAACTGAAGGCCAAGCCCAAGAAACCCGCAGTGGTGCTGGTGCACGGTTTCGCCGCGGAGGGGCTGGTGACGTGGCAGTTCCAAGTGGGCGCGTTGACGAAGAAGTACGCGGTTTATGTTCCGGACCTTCTGTTCTTCGGAGGGTCCACGACGGACAAAACGGAACGGTCGCCGAGGTTTCAAGCGGAGTGTTTGGTTACGGGGTTGAGGAAAGTGGGGGTGGAGAAGTGCGTGGTGGTGGGTTTCAGTTACGGGGGAATGGTGGCGTTCAAGATGGCGGAGATGTACCCTGAAATGGTTCAGGCTTTGGTGATTTCTGGGTCCATTTTGGCCATGACGGACTCCATCAGCATCTCGTCGCTGCAAGAACTTGGCTTCTCTTCTTCTTCGGAGCTCTTGTTGCCTACTTCCGTTAAGGGGCTTAAGGCGCTTTTGTCCGTCGCTGCGCACAGAAAACTCTGGTTCCCGGATCGTTTGCACAAGGATTTTCTTGAGGTGATGTTTACAAATAGGAAGGAGCGAGGTGAGCTTTTGGAGGGCTTAGTAGTTAGCAATAGAGATATCACCATCCCAAATTATCCACAGAGAATTCATCTCTTATGGGGCGAGAATGATCAAATTTTCAAACTGGAGCATGCACAAAATATGAAAGAACAACTAGGGGATGGCACCACGTTTGAAGGCATAAAGAAAGCTGGTCACCTGGATATCAATGAATCCGTTGATTTTGTTGATGATTTAATGTTAACTAACGTTGAAGGAGATGAATGTAATGATGTGTGCTATGAAACTGAAGATATTCCTGTAAATGATATGCAAGATATTATTAGTCTTGATATGCATATTATGAGTGTTGTGGAATTAATCAAATGTCATTTTGTAATCCTTGAAGTAGTTTATTTGCTTTATAATTGGTATTGTCATGATAACATAGTTACCTGTTCTCGTGATGGAAGTGCAATTATATGGGTTCCCAGATCACGTAGATCTCATGGAAAAGTAGGACGTTGGACTCGTGCATATCATCTAAAAGTGCCACCACCACCATTGCCTCCTCAACCTCCGCGAGGTGGTCCAAGGCAGAGGTTTCTACCTACACCTCGTGGTGTCAATATGATTATATGGAGCCTGGACAATCGTTTTGTACTTGCAGCTATTATGGGTAATGTACTTGCTAAAGTTGGAGGCACCTCAAACGGTGAGATAGTTGGTCCCAAGATTTAA 1383 0.47 MVNLVAAQKPLLHGLMKMAGIRPYTVEIEPGTVMSFWVPSETITKPNKKDEKPKLKAKPKKPAVVLVHGFAAEGLVTWQFQVGALTKKYAVYVPDLLFFGGSTTDKTERSPRFQAECLVTGLRKVGVEKCVVVGFSYGGMVAFKMAEMYPEMVQALVISGSILAMTDSISISSLQELGFSSSSELLLPTSVKGLKALLSVAAHRKLWFPDRLHKDFLEVMFTNRKERGELLEGLVVSNRDITIPNYPQRIHLLWGENDQIFKLEHAQNMKEQLGDGTTFEGIKKAGHLDINESVDFVDDLMLTNVEGDECNDVCYETEDIPVNDMQDIISLDMHIMSVVELIKCHFVILEVVYLLYNWYCHDNIVTCSRDGSAIIWVPRSRRSHGKVGRWTRAYHLKVPPPPLPPQPPRGGPRQRFLPTPRGVNMIIWSLDNRFVLAAIMGNVLAKVGGTSNGEIVGPKI 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g01187 460 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 2 290 - -
Cca11g01187 460 PANTHER SI:DKEY-122A22.2 2 290 - -
Cca11g01187 460 SUPERFAMILY alpha/beta-Hydrolases 60 301 IPR029058 -
Cca11g01187 460 Pfam alpha/beta hydrolase fold 62 176 IPR000073 -
Cca11g01187 460 Gene3D alpha/beta hydrolase 18 306 IPR029058 -
Cca11g01187 460 PRINTS Alpha/beta hydrolase fold signature 146 159 IPR000073 -
Cca11g01187 460 PRINTS Alpha/beta hydrolase fold signature 250 264 IPR000073 -
Cca11g01187 460 PRINTS Alpha/beta hydrolase fold signature 88 103 IPR000073 -
Cca11g01187 460 PRINTS Alpha/beta hydrolase fold signature 132 145 IPR000073 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g01187 Cca-Chr11 29898547 29916878 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g01187 - - gmx:100816070 481.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca06g01337 06 28240165 28244062 Cca11g01187 11 29898547 29916878 PCT