Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g01010 ATGTCGGTAATGAGAAAAAGACTCGCTTGTTGCACAAAGGAAACCAAAATCAGTGTTGATTTTGATGAGCCAAACAGGGTTATGACATTTAATGGCCTTGAGAATTGCATTCCGGATAATCAATCTTATGGAGATGAAAGCAGAACGAGTAGAGGAGATGGATGTATAACTGATTCATTCAATGATGATGACTCCAGCTGTTCATCCAGTAAAGATGGTTTTGGATCATTCTCTTCAAAGTGTTTGACCATGAAAAGAGATGAACGAGGATTGGAAGAGTGGGAACTCTCAGAAAGTCCTCAACATTTTTATGTTAAAGAGAAGCCTGCTTATGAACTCCCATGTTCAGAAGTAGAAGCCATGAGAGAAAAGTTTGCAAAGCTGTTGTTAGGTGGTGATATTACAGGAGGAGCTAAAGGCCTCAGTACAGCTTTAGCACTATCTACTGCCATCACAAACCTTGCAGTGACAGTTTTTGGTGAGTTGTGGAAATTGGAACCTCTATCTGAAGAGAGGAAGAGCAAATGGAAACGAGAAATGGGTTGGTTGTTGTCTCCTACCAACTATATGGTTGAGTTAGTTCCTGCTAAGCAAAATGGTGCCAACGGTGGCATCTTTGAGATAATGACCCCAAAAGCTCGTGCAGACATCCAAATGAATCTTCCAGCACTTCAGAAGTTGGACTCAATGCTTATTGAAACACTAGACTCAATGGTGCATACTGAGTTTTGGTATGCAGAGGAAGGAAGCAGGTCAGAAGGGAGGACCACAGGTGGAAGACAAAGCAAAAGATGGTGGCTTCCATCACCTCGAGTACCAAGAACTGGGCTTTCTGATATTGAAAGAAAGAGGTTGCTTCATCAGGGAAGGGTAGTGCACCAAATATTCAAGGCTGCCAAAGCTATCAATGATAACATGTTGCTTGAAATGCCCGTCCCGATGATAATTAAAGATGCACTTCTGAAGTCCGGAAAGACAAGCCTTGGAGAGGAACTACACAAGGTTCTGATGGCTGGATCGAGCTCTGAAGAAGAAATGCTTAAAGCTCTCAATTTGGAATCTGAACATACTGCCCTAGAGACAATTAATAGATTGGAAGCTGTTATATTTTCATGGAAAGAGAGAATTATACAAGAAAATAGTGACAAATCGCCAGTTCGAACCTCATGGTCTTTCATGAAGGACCCTATGTCAGGTGTGGATAAGATGGAACTTTTGCTGGACCGAGCAGAAACACTTTTCAATCTACTTAAAACCAGATATCCAAACCTTCCTCAAACGTTTCTGGATGCTGCAAAAGTTCAATATGGCAAGGATATTGGGCATGCCATTTTGGAAGCATACTCTAGAGTTCTTGGAAGTTTAGCCTTCAGCATACTGTCTAGAATAGGAGATATATTGCAAGAGGATGCTTTAAGCAATCCCAATTCACCTATTTCTACAACAAGTTGCTCACCTGGGATAAATCCTCCTGAAGCTTGGGTGGTTGGTTCACGTATCAGGCACTCATTAATTGATAAGATGAACGAGGCAGATGCACAAAATTGTGATTCTAGTTGTGGTAGTAATTCTGATACAGGACTCTCATCTACTGAGGCCAAAGCCAGCTCTGCAAGTGCCACCCCAAGCCGTGGTCGATTGTGGTGCATTGGTAGAGGCTTGTAA 1665 0.421 MSVMRKRLACCTKETKISVDFDEPNRVMTFNGLENCIPDNQSYGDESRTSRGDGCITDSFNDDDSSCSSSKDGFGSFSSKCLTMKRDERGLEEWELSESPQHFYVKEKPAYELPCSEVEAMREKFAKLLLGGDITGGAKGLSTALALSTAITNLAVTVFGELWKLEPLSEERKSKWKREMGWLLSPTNYMVELVPAKQNGANGGIFEIMTPKARADIQMNLPALQKLDSMLIETLDSMVHTEFWYAEEGSRSEGRTTGGRQSKRWWLPSPRVPRTGLSDIERKRLLHQGRVVHQIFKAAKAINDNMLLEMPVPMIIKDALLKSGKTSLGEELHKVLMAGSSSEEEMLKALNLESEHTALETINRLEAVIFSWKERIIQENSDKSPVRTSWSFMKDPMSGVDKMELLLDRAETLFNLLKTRYPNLPQTFLDAAKVQYGKDIGHAILEAYSRVLGSLAFSILSRIGDILQEDALSNPNSPISTTSCSPGINPPEAWVVGSRIRHSLIDKMNEADAQNCDSSCGSNSDTGLSSTEAKASSASATPSRGRLWCIGRGL 554
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g01010 554 ProSiteProfiles PRONE domain profile. 108 480 IPR005512 GO:0005085
Cca11g01010 554 PANTHER ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 14 20 552 - -
Cca11g01010 554 MobiDBLite consensus disorder prediction 515 539 - -
Cca11g01010 554 PANTHER ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 1 20 552 IPR038937 GO:0005085
Cca11g01010 554 Pfam PRONE (Plant-specific Rop nucleotide exchanger) 116 474 IPR005512 GO:0005085
Cca11g01010 554 Gene3D PRONE domain, subdomain 1 347 479 - -
Cca11g01010 554 Gene3D PRONE domain, subdomain 1 110 346 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g01010 Cca-Chr11 23123902 23131885 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g01010 - - gmx:100779636 934.095
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca11g01010 11 23123902 23131885 Cca11g01010 11 23123902 23131885 ECH