Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g01008 ATGGAGAAGAATGGGGAAAGCAACAGCAGAAGTGGTGGTTTGAGGGTCGGGTCAGGGTTGAGTCCGAACGAGTTAAAAGTTCACACTTTGGTTGATCTTGTAGATGGTGTAGAGAGAGAGAAAGAGCAAAAACATCTTAAAAATTCTCTCTCTCCAAGGCAGATGAAGTCCTTAGTTGCTCTCTGTGACACCATCGTACCTTCCATCGACAACAACCTTGTTGCCTCTCTCCACGAACCTGTTGCCAACTTCTATCGGACTTCATCTTCCATGGCTGGAACACCTCACCATCTTGGGATATTAATAAGTGAGAAAATGAAACACCCAAGAACATGGTTGTTGCTATTGACATTATGGCTACTATCTACATGGTTTGGCACATTCATACTATGTGGCATGGCGAGTCTCTCAACAAAGTTTCCGTTCTTCCAAAGCTTCCCTGACATGTCTCTGCAAAAACGCCAAAAAGTTATGCAGTCTTGGTCACTCAGTTATTTTCGACTCCTTAGGATGTTATTCAGAACCATCAAGCTTCTCACCCTCCTTGTCTTCTTCACGCAGCTAGATGAAGCAGAAGATAATCCATCATGGGAGGCAATTGGATATTGTGGACCTGATCCAGAGTTCAAAGCACAGTTGAAGAATCACTTTTTTCATGGAACATCAAATgaaggaggacaagaggaaaaagaagtagaagaagTTAGAGGACCACTTTACAAAGGTCTTGTGCATATAAATAACCCAAGAGACATCATTGCAGATTCTCTAAGACAATTTGGATTCTCTGTCTCTACCACTCCTATAAAGGCCAAGGCTTCTAACATGTCATCTCCATCATTAGTTATCCAATGTGATGCAGTGGTTGTTGGTTCTGGCTCTGGAGGTGGGGTTGTAGCTGGAGTTCTAGCAAATGCTGGTTATAAAGTTTTGGTCTTGGAGAAAGGAAGCTATTATGCTAGGAATAATCTTTCCCTTCTTGAAGGACCTAGCATGGATCAAATGTACCTCTCACGTGGTTTGGTTGCAACAGATGACATGTCTGTGCTGATACTAGCAGGATCCACAGTTGGTGGGGGGTCTGCAATCAATTGGTCAGCCAGCATTAAAACCCCTCAACATGTATGCAAGGAGTGGTGTGAACGCTATGAGCTAGAACTGTTTGAAAGTATGTTGTACAGAGAAGCCTTGGATGCTGTTTGTGACAAAATGGGTGTTCAATCTGAGATTGAAGAGGAAGGGTTCAATAATGCAGTCTTGAGAAAAGGGTGTGTGGAAATGGGGTATCCAGTGAGTAACATTCCCAGGAATGCTTCATCGGATCACTACTGTGGCTGGTGTTGCATGGGGTGCAAGGATGGAAGGAAGAAAGGTACATCAGAGACATGGCTAGTGGACTTGGTGAAATCAGGTAATGGAGCAATCATTCCAAGTTGTGAGGCTATACAAGTCTTGCACAAGAAAAAGAAAGGAAGAGACAGAAGAATAGCATGTGGAGTGGCCTTTGCAATTGAACAAAAGGGAAGCAAAGACATTTGTGTAGTGGAGTCCAAGGTCACAATTGTAGCCTGTGGAGCACTTAGTACTCCAGCATTACTCAAAAGAAGTGGCTTGAAGAATGAAAACATAGGAAGACACTTGCATCTTCATCCAGTGGCAATGGCTTGGGGCTACTTTCCTGATTCACCTTCACCTGAGGTGTGGCCAGAGAAACATAAGAAAAGCTATGAAGGGGGGATTATGACAGCAATGTCCACAGTTGTTGCTGAGTTTGACAAATCTGGATATGGGGCAGTGATCCAAACACCTGCATTGCACCCTGGTATGTTCTCAATTCTAACACCATGGACTTCTGGAATGGATATAAAAGATCGAATGCGCAAGTTCTCAAGAACAGCTCATGTGCTTGCACTGGCTAGGGATCAAGGATCAGGAACTGTGAATTCACCTACATGTATAAGTTATCAGTTGAAAGATGTGGACAAGGAGAATTTAAAAATGGGAATTGAGAAGGTACTGAGAATTCTTGCAGCTGCTGGAGCTGAAGAAATTGGCACTCATAACAACAAGGGAAAGAGCTTAAATGTTAAGAAGGTGAGCTATAATGAGCTTGAGAAATTTGTCAAAGAAGAAAGTTCAAGGCCTTTCACAGATCTTTCAACACCATTATGTTCTGCCCATCAAATGGGGAGCTGTAAGATGGGTAACAATCCAAAGGAATCAGTTGTGAACCAAATGGGGGAGACATGGGAAGTGGAGGACCTTTATTTGGCAGACACAAGTGTCTTTCCTTCAGCTTTGGGTGTGAATCCAATGGTCACTGTTCAGGCTATTGCTTACTGCACAGCACAATATATTCTTCAAGTTCTCAGAAGAAAAATAAAGTGA 2388 0.4238 MEKNGESNSRSGGLRVGSGLSPNELKVHTLVDLVDGVEREKEQKHLKNSLSPRQMKSLVALCDTIVPSIDNNLVASLHEPVANFYRTSSSMAGTPHHLGILISEKMKHPRTWLLLLTLWLLSTWFGTFILCGMASLSTKFPFFQSFPDMSLQKRQKVMQSWSLSYFRLLRMLFRTIKLLTLLVFFTQLDEAEDNPSWEAIGYCGPDPEFKAQLKNHFFHGTSNEGGQEEKEVEEVRGPLYKGLVHINNPRDIIADSLRQFGFSVSTTPIKAKASNMSSPSLVIQCDAVVVGSGSGGGVVAGVLANAGYKVLVLEKGSYYARNNLSLLEGPSMDQMYLSRGLVATDDMSVLILAGSTVGGGSAINWSASIKTPQHVCKEWCERYELELFESMLYREALDAVCDKMGVQSEIEEEGFNNAVLRKGCVEMGYPVSNIPRNASSDHYCGWCCMGCKDGRKKGTSETWLVDLVKSGNGAIIPSCEAIQVLHKKKKGRDRRIACGVAFAIEQKGSKDICVVESKVTIVACGALSTPALLKRSGLKNENIGRHLHLHPVAMAWGYFPDSPSPEVWPEKHKKSYEGGIMTAMSTVVAEFDKSGYGAVIQTPALHPGMFSILTPWTSGMDIKDRMRKFSRTAHVLALARDQGSGTVNSPTCISYQLKDVDKENLKMGIEKVLRILAAAGAEEIGTHNNKGKSLNVKKVSYNELEKFVKEESSRPFTDLSTPLCSAHQMGSCKMGNNPKESVVNQMGETWEVEDLYLADTSVFPSALGVNPMVTVQAIAYCTAQYILQVLRRKIK 795
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g01008 795 Gene3D - 269 590 IPR036188 -
Cca11g01008 795 MobiDBLite consensus disorder prediction 1 20 - -
Cca11g01008 795 Pfam GMC oxidoreductase 653 781 IPR007867 GO:0016614
Cca11g01008 795 Pfam GMC oxidoreductase 286 552 IPR000172 GO:0016614|GO:0050660
Cca11g01008 795 PANTHER LONG-CHAIN-ALCOHOL OXIDASE 29 793 - -
Cca11g01008 795 SUPERFAMILY FAD/NAD(P)-binding domain 283 788 IPR036188 -
Cca11g01008 795 PIRSF Lg_Ch_AO 37 795 IPR012400 GO:0046577
Cca11g01008 795 PANTHER LONG-CHAIN-ALCOHOL OXIDASE FAO1-LIKE PROTEIN 29 793 - -
Cca11g01008 795 Gene3D - 708 794 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g01008 Cca-Chr11 23026576 23038352 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca11g01008 38 790 Acyl Lipid Metabolism Gene Families AT4G19380 59.416 0.0 879
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g01008 K17756 - gmx:100778208 1322.38
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca11g01008 11 23026576 23038352 Cca11g01008 11 23026576 23038352 ECH