Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g01007 ATGGAAAAACCTCCTAGATTCAAATCGACAGTGATCTTCTTCATCATCATTTCCCTCTCCCTTGGCTTAATTTCCTTTCTCTTGTGTATAGCCGCTGAGATAAAGAGGAATAAGGAGGAGGATCTCAGGTGGAATGGGAAACTATGTTATTTGCCATCAAGCAAGGCATTTGGATTGGGGATTGCAGCTTTAGTTAGTGTCTTTCTTGCCATGATCATTGGGAATTCTATATTATTAAATTATTCTTGTTGGAGAAGCAAAAGTAAATCCCAGTACAAGATTCCTTCCTCTGCAAAGGTTCTGATTTTGATATCTTGGGCAAGCTTTGGATTTGCAGCTATTTTATTGATTGCAGCCACAAGCATGAACAGAAGGCAGCCATATAGGGTTGGTTGGTTGAATGGTGAGTGCTACCTAGTCAAAGGAGGAACTTATACAGGCTCAGCCATATTGGTCCTGGTTACAGTGTGTTCTTTAAATGCTTCAGCTTTCTCAACAATAAAATCTAGTCAAACAAATCAGCATACAAAGATGCACAAACAAACTGGGTGA 552 0.3967 MEKPPRFKSTVIFFIIISLSLGLISFLLCIAAEIKRNKEEDLRWNGKLCYLPSSKAFGLGIAALVSVFLAMIIGNSILLNYSCWRSKSKSQYKIPSSAKVLILISWASFGFAAILLIAATSMNRRQPYRVGWLNGECYLVKGGTYTGSAILVLVTVCSLNASAFSTIKSSQTNQHTKMHKQTG 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g01007 183 Pfam Protein of unknown function (DUF1218) 63 156 IPR009606 -
Cca11g01007 183 PANTHER OS07G0462200 PROTEIN-RELATED 1 177 - -
Cca11g01007 183 PANTHER PROTEIN MODIFYING WALL LIGNIN-1 1 177 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g01007 Cca-Chr11 22994992 22997192 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g01007 - - gmx:100500694 301.982
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca11g01007 11 22994992 22997192 Cca11g01007 11 22994992 22997192 ECH