Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g01001 ATGGTTTGGAAAAAAGGGTGTGAGGAAGTGGCTAATTCCAAGCCTCTGTTCCTCACGATCTACACTGTTGTCATCATTGGCATCGTCGTTTCCTCCTTCTACGTTTTCTCTGCTATATACTCAGCCAGCCCTCCTGCTGCTCAGTCTTCTGCATGGCTCTCGTCACTTTCGAGCCAGGAAACTCCTGTTACGGATCAGACACTAAATGTTTCTAGGTCAGCAATGGTTCATACTGTATCCACTCCTTCCCCTGTGCCGCAAAATGATTTGGCTAGGTCTATATGGGATGTTCCACCACTCAATAAAAAAATGCCACCTTTGAAGGATTTCCGGTTGACCAAGGAACTGGTTCAGCAAAGGGTGAAGGATAATGTTGTGATAGTAACCTTTGGTAACTACGCTTTCATGGATTTTATTCTGACGTGGGCTAAACAATTGACAGATCTGGGAGTTTCTAATTTCCTTGTTGGTGCATTGGATACCAAATTATTGGAGGCACTGTATTGGAAAGGGATACCAGTTTTTGACATGGGTAGCCATATGGGCACAGCAGATGTTGGCTGGGGGTCTCCAACATTTCATAAAATGGGGAGAGAGAAAGTTATTCTGATAGACTCAATACTTCCTTTTGGTTATGAGCTGTTGATGTGTGATACTGACATGGTTTGGTTGAAGAACCCACTTCCATATCTTGCTCGCTATCCGGAAGCAGATGTTTTAACGTCAAGTGATCAAGTAATACCAACAGTTGTTGATGATAGTTTGGAAATTTGGCAAGAAGTTTCTGGCGCCTACAACATAGGAATTTTCCATTGGAGACCTACAGAATCTGCAAAAAAATTGGCAAAGCAATGGAAAGAAATGCTTCTAGCTGATGACCAGATATGGGATCAGAATGGGTTTAATGATATTCTTCACAATCAGTTAGGTCCTTCTGTTGATGATGAAAGCGGGCTTGTTTTTGCTTTTGATGGAAAACTGAAGCTGGGGATTTTGCCTGCAAGTATCTTCTGTAGTGGACATACATATTTTGTCCAGGCTATGTACCAGCAACTAAGATTGGAGCCATATGCAGTGCACACAACATTTCAATATGGAGCCACAGAAGGAAAGCGCCATCGATTGAGAGAAGCCATGCACTTCCTTGATCCACCTGCATACTACAATCCCCCTGGGGGTTTCTTGTCATTTAAGCCATATATTCCAAAAAGCATGTTGCTAAGTGGGGAGCATAATATTGAATCACATTTTACTCTTGTTAATTACCAAATTAAACAGATTAGGACAGCACTTGCAATTGCTTCCCTTTTGAACAGAACGCTGGTCATGCCTCCATTATGGTGCAGGATTGATAGGCTATGGTATGGCCATCCTGGTATTTTGGAAGGCTCCATGACTAGACAACCTTTTCTCTGTCCTTTGGACCATGTATTTGAGGTCAATGTCATGTTGAAAAAGCTCCCTGAAGAAGAGTTTGGTCCTCAAATAGATATTAGAGAGTACTCAATATTTGATAATCCCTCAATGCCGTCAGAGGTAAAAAAGTCATGGCTTGATGTTCAGCTCTGTAAAGAAGGAACCCGAGATTGTGATGCATCAAATAGTACCATTGCTGGGGGAGTACTTAAATTTCCAAAGCACAGCAATGAAGAAACGTTTATGAAAGTATTCTCATCATTCAAGGATGTTAAAGTGATCAAGTTCTTTTCGGTGCAAGACGCTTTCACAGGTTTCACCACCAAGGAAAGGGAAGAAAAATTCAGAAATCGCGTTAAGAGGTATGTGGGAATATGGTGCTGTGTGCCAGATCACAGTCCCGGTCACATATATTATGATATGTACTGGGATGAAAAACCAGGATGGAAAGCAATTCCTCCCCAAACTTCTGAGGATGATCATCCACCATGGTGA 1911 0.4207 MVWKKGCEEVANSKPLFLTIYTVVIIGIVVSSFYVFSAIYSASPPAAQSSAWLSSLSSQETPVTDQTLNVSRSAMVHTVSTPSPVPQNDLARSIWDVPPLNKKMPPLKDFRLTKELVQQRVKDNVVIVTFGNYAFMDFILTWAKQLTDLGVSNFLVGALDTKLLEALYWKGIPVFDMGSHMGTADVGWGSPTFHKMGREKVILIDSILPFGYELLMCDTDMVWLKNPLPYLARYPEADVLTSSDQVIPTVVDDSLEIWQEVSGAYNIGIFHWRPTESAKKLAKQWKEMLLADDQIWDQNGFNDILHNQLGPSVDDESGLVFAFDGKLKLGILPASIFCSGHTYFVQAMYQQLRLEPYAVHTTFQYGATEGKRHRLREAMHFLDPPAYYNPPGGFLSFKPYIPKSMLLSGEHNIESHFTLVNYQIKQIRTALAIASLLNRTLVMPPLWCRIDRLWYGHPGILEGSMTRQPFLCPLDHVFEVNVMLKKLPEEEFGPQIDIREYSIFDNPSMPSEVKKSWLDVQLCKEGTRDCDASNSTIAGGVLKFPKHSNEETFMKVFSSFKDVKVIKFFSVQDAFTGFTTKEREEKFRNRVKRYVGIWCCVPDHSPGHIYYDMYWDEKPGWKAIPPQTSEDDHPPW 636
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g01001 636 Pfam Nucleotide-diphospho-sugar transferase 151 375 IPR005069 -
Cca11g01001 636 PANTHER ARABINOSYLTRANSFERASE XEG113 1 636 - -
Cca11g01001 636 PANTHER NUCLEOTIDE-DIPHOSPHO-SUGAR TRANSFERASE FAMILY PROTEIN 1 636 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g01001 Cca-Chr11 22354221 22361901 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g01001 K20784 - gmx:100780346 1166.76
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca11g01001 11 22354221 22361901 Cca11g01001 11 22354221 22361901 ECH