Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g00925 ATGGCGTCCTATTTACATAACTATGTTCTTGCTATTTTACTTTTGGCCATAATCCAATTTAAAGCCACTTCTGCAAGCTCTcaccaccaccaccaccaccTCAAATCCCTTCACTTCTCGCTGTTTCAACATGAGACCATAAACAAAACCGGATATATCATAGTGGAGGGTATTAGTATAAAAGGAGGAGCAGGAATCTCTCAAACTACAACCCCCTTTGGAACCTTATTTGTCTTTCAGGACCCTTTGACTGTTGCAGCCAATAGATCCTCCAAACTAGTTGGGATTTCAGAAGGAACTTCCATCACATCTAGTGTTGACGGGCTTCAAAGCATTTCAATTGCAAAGCTAACTCTGCGTTTGAAGCACCACAAGGGCTCTATTTCCGTTGTTGGTGCAATAAATAATATCAAACCCTCGAACCTTCCAGTGGTAGGAGGCACTGAAGATTTCATGTTTGTGCAAGGCTATGTCACTTCTTCTCCGGTTGATCTTAAGGGTCTTACTGTTGTCTACAAGATTGAGTTTCATCTTTACTGGCCTCCATATGCAACTCATCACGCCTCATGA 570 0.4018 MASYLHNYVLAILLLAIIQFKATSASSHHHHHHLKSLHFSLFQHETINKTGYIIVEGISIKGGAGISQTTTPFGTLFVFQDPLTVAANRSSKLVGISEGTSITSSVDGLQSISIAKLTLRLKHHKGSISVVGAINNIKPSNLPVVGGTEDFMFVQGYVTSSPVDLKGLTVVYKIEFHLYWPPYATHHAS 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g00925 189 Pfam Dirigent-like protein 38 177 IPR004265 -
Cca11g00925 189 PANTHER DIRIGENT PROTEIN 1 186 - -
Cca11g00925 189 Gene3D - 20 178 IPR044859 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g00925 Cca-Chr11 19272923 19273985 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g00925 - - gmx:100817263 311.997
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca11g00925 11 19272923 19273985 Cca11g00925 11 19272923 19273985 ECH