Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g00924 ATGGAGAATCCAGATTCTGTACAGAAGCTGCACACGCAAATGCGGCTTTGGGAATTTCCGAGTCAGTATGTGATTGAACCAATCGATGGATCTTCCTGTTCTGCTTTGGCAGTTAGTCGAAAAGATGGCTCCACGATGCTCATTGATGAGATTCCTGAATGCAGAACCCTTCGAGTTCCCAAGATTTATACGATTTATGGTGTGGCTGGGATTTTAAGGCTTTTGTCTGGATCGTATTTGGTGGTTATAACTGGGCGCGAATGTGTTGGATCCTACTTGGGGCATCCAATTTATAAAGTTTCATCTTTGAAGGTTTTTCCATGTGATTGTTCTCTAAATAATACCTCTACTGAACAGAAGAAGACAGAGATGGAATTTTCAGGGATATTAAATGTTGCTGAGAAGACTACCGGTCTGTTCTTCTCATACGACGCTAATTTAACTCTCAGTGTCCAACGACTAAATGAACTTGGTGAAGAGTCTAGGTTGCTTCCCCTTTGGAGACAGGCAGAGCCACGGTTTTTATGGAATAATTATCTGTTGGAAGTGCTTATAGATAACAAGCTTGACCCATTCTTGCTCCCTGTAGTCCAAGGCAGCTTTCATCACTTTCAATCAGCTATTGGGAAAGATATCATTGACATCACTTTGATTGCTAGAAGATGCACAAGAAGAAATGGAACTCGAATGTGGAGAAGAGGAGCTGATTCTGATGGGTATGTGGCTAATTTTGTGGAAACAGAACAAATTATGAAGCTCAACGGTTATACAGGATCATTTGTTCAGGTTCGTGGTTCAATTCCACTGCCTTGGGAGCAAATTGTTAACTTAACATATAAACCAAAGTATGAGTTATTGAAACATGAGGAAGCTCCCCGAGTCCTAGAGAGGCATTTCTTAGATTTAAGGAAAAAATATGGGGCCGTGTTAGCTGTTGATCTTGTCAACGAGCATGGAGGAGAGGGGCGGCTATGTGAAAAATTCGGAAGCACAGTGCAAAATGTAGCTAATAATGATGTCAGATATGTGCACTTTGATTTCCATCACATTTGTGGGCACGTTCATTTCGATCGTCTCTCAATCCTTTATGATCAAATTTCGGATTTTATTGAGAGAAATGGATATCTTCTATTGAATGAAAAAGGAGAGAAAATGAAGGAACAACTTGGGGTTGTTAGGACGAATTGTATTGATTGCCTAGACCGTACAAATGTTACTCAGAGCATGATAGGCCGAAATATGCTAGAATGCCAGCTGAGAAGGCTTGGGGTCTTTGGTGCTGAAGAAACCATTTGTTCACATCCAAATCTAGATGAAAAATATAAGATATTGTGGGCTGATCACGGGGATGATATAAGTACTCAATATACAGGCACTCCTGCCCTCAAAGGAGATTTCGTCCGATTCGGGCATCGCACAATTCAGGGGATACTAAATGATGGTTGGAATGCTCTTATGCGCTATTATTTGAATAACTTTTGTGATGGAACAAAACAGGATGCAATTGATCTCCTGCAAGGACACTATATAGTTTCTATGAACCGAGATAAGCCTCCTTCTTCTCAGAACCAAGGCCTTGAAGCTATTATT 1590 0.4082 MENPDSVQKLHTQMRLWEFPSQYVIEPIDGSSCSALAVSRKDGSTMLIDEIPECRTLRVPKIYTIYGVAGILRLLSGSYLVVITGRECVGSYLGHPIYKVSSLKVFPCDCSLNNTSTEQKKTEMEFSGILNVAEKTTGLFFSYDANLTLSVQRLNELGEESRLLPLWRQAEPRFLWNNYLLEVLIDNKLDPFLLPVVQGSFHHFQSAIGKDIIDITLIARRCTRRNGTRMWRRGADSDGYVANFVETEQIMKLNGYTGSFVQVRGSIPLPWEQIVNLTYKPKYELLKHEEAPRVLERHFLDLRKKYGAVLAVDLVNEHGGEGRLCEKFGSTVQNVANNDVRYVHFDFHHICGHVHFDRLSILYDQISDFIERNGYLLLNEKGEKMKEQLGVVRTNCIDCLDRTNVTQSMIGRNMLECQLRRLGVFGAEETICSHPNLDEKYKILWADHGDDISTQYTGTPALKGDFVRFGHRTIQGILNDGWNALMRYYLNNFCDGTKQDAIDLLQGHYIVSMNRDKPPSSQNQGLEAII 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g00924 530 Pfam SacI homology domain 66 351 IPR002013 GO:0016791
Cca11g00924 530 PANTHER PHOSPHOINOSITIDE PHOSPHATASE SAC6 8 529 IPR030069 GO:0052866
Cca11g00924 530 PANTHER PHOSPHATIDYLINOSITIDE PHOSPHATASE SAC1 8 529 - -
Cca11g00924 530 ProSiteProfiles Sac phosphatase domain profile. 130 458 IPR002013 GO:0016791
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g00924 Cca-Chr11 19249152 19267858 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca11g00924 1 529 Acyl Lipid Metabolism Gene Families AT3G51460 72.968 0.0 845
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g00924 K21797 - gmx:100796999 932.554
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca11g00924 11 19249152 19267858 Cca11g00924 11 19249152 19267858 ECH