Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g00919 ATGGCTCATCTGAGCCACAAGACCTTGGTTTCACTTATGTCTGAACATGAAGCTGAGGAAGGCCAATCCAATATTCTTGGTTCCTTTTCTTCTTGGCCTCATCGTTTGGAGAAAGCTTTCCCCGTTTATGCCATGGGAATTCCCAACCCTGCGTTGGATTCTTCACTTCACAATTCGGAATGTCTTGATCCTATCTGGGACGCTATCAGAAAAGAAGCTAAGTTAGAGGCAGAAAAGGAGCCAATTTTAAGTAGCTTCTTCTATTCCTCTATTCTGTCTCATAATTGCTTGGAGAAAGCATTGGCTTTTGCTCTTGCTAACCGTCTCCAAAAGCCTACTCTTTTGGCAACTCAGTTGATGGATACATTTTTTAATGTCATGAAGCAAGATAAAGGTATCCAGCAATCGATTCGATTGGATATCCAGGCATTTAAAGATCGGGATCCTGCATGTTTGTCATATTGCTCAGCACTTTTATATATGAAGGGTTTCCAGTCTTTGCAAGTATATCGAGTAGCCCATGCTTTGTGGGGCCAGGGACGTAAAATTTTGGCCTTAGCTTTGCAAAGTCGAATTAGTGAGGTTTTTGGAGTTGATATACATCCCGCTGCGAAAATTGGGGATGGAATTTTAGTAGATCATGGGACAGGTGTTGTTATTGGTGAAACTGCTACTATTGGAAACAGGGTTTCATTGATGCAAGGTGTAACCTTGGGTGGCACAGGAAAGGAAACAGGTAATCGGCATCCCAAAGTTGCTGAAGGTGTGCTAATTGGAGCTCATGCATCTATACTTGGGAATATAAGAATTGGCGAATGTGTGATGATAGCTGCTGGCTCCCTTGTGTTACAAGAGGTCTCTCCTCACAGCATTGTGGCTGGTGTACCAGCAAAGGTTATTGGAAGAGTACATGACCACTATCCATCCTTAACCATGCAGCAAGGTAATTAA 951 0.428 MAHLSHKTLVSLMSEHEAEEGQSNILGSFSSWPHRLEKAFPVYAMGIPNPALDSSLHNSECLDPIWDAIRKEAKLEAEKEPILSSFFYSSILSHNCLEKALAFALANRLQKPTLLATQLMDTFFNVMKQDKGIQQSIRLDIQAFKDRDPACLSYCSALLYMKGFQSLQVYRVAHALWGQGRKILALALQSRISEVFGVDIHPAAKIGDGILVDHGTGVVIGETATIGNRVSLMQGVTLGGTGKETGNRHPKVAEGVLIGAHASILGNIRIGECVMIAAGSLVLQEVSPHSIVAGVPAKVIGRVHDHYPSLTMQQGN 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g00919 316 ProSitePatterns Hexapeptide-repeat containing-transferases signature. 258 286 IPR018357 GO:0016740
Cca11g00919 316 SUPERFAMILY Trimeric LpxA-like enzymes 64 313 IPR011004 -
Cca11g00919 316 PANTHER SERINE ACETYLTRANSFERASE 2-RELATED 13 314 - -
Cca11g00919 316 SMART SATase_N_2_a 65 169 IPR010493 GO:0005737|GO:0006535|GO:0009001
Cca11g00919 316 TIGRFAM cysE: serine O-acetyltransferase 137 298 IPR005881 GO:0005737|GO:0006535|GO:0009001
Cca11g00919 316 Gene3D serine acetyltransferase, domain 1 49 198 IPR042122 -
Cca11g00919 316 PANTHER SERINE ACETYLTRANSFERASE 13 314 - -
Cca11g00919 316 Pfam Serine acetyltransferase, N-terminal 65 168 IPR010493 GO:0005737|GO:0006535|GO:0009001
Cca11g00919 316 CDD LbH_SAT 196 296 IPR045304 -
Cca11g00919 316 Gene3D Hexapeptide repeat proteins 199 315 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g00919 Cca-Chr11 19073043 19078947 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca11g00919 36 314 Miscellaneous Gene Families AT2G17640 68.459 2.60e-131 375
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g00919 K00640 - gmx:100778586 538.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca11g00919 11 19073043 19078947 Cca11g00919 11 19073043 19078947 ECH