Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g00914 ATGATAGCAACGGTTGCAATTCTCTATGGGCTGGGCCCATTGAAGGCGGTCCAGTTGAGATGGCCCGTTAAATCCGAAATTGTGGCACAGGGAGAGGTTGTGGGACCCGAAGACTTGGCTTACGATAAAAGGAGACGAGTCATCTACACGGGTTGTGAGGATGGGTGGATTAAGCGAGTCACGGTGGCTGACTCGGTGGCTGACACGGTGGTCGAAAATTGGGTCAACACAGGTGGAAGACCCCTTGGACTTGCTCTTGAGAAAAGTGGTGAACTCATGGTTGCGGACGCAGTTAAGGGGTTGTTGAGAGTGACAAGAAAAAAGAAGGTTGAGGTTCTAGCGGATGAGGTTGAGGGATTGAAATTCAACTTAACAGATGGTGTTGATGTAGCAGAAGATGGTACAATTTATTTCACAGATGCTACATACAAATACTCTTTGGAAGATTACTACAATGACATCATTGAAGGTAGGCCTCATGGTAGATTCATGAACTATAACCCAGAAACAAAAAACGTAACTGTGCTTGCTCGCAACCTGTACTTTCCTAATGGAGTTGTAGTCTCATCGGATCAGCATTTCGTGATATACTGTGAAACTATCAAGAAAAGATGCAGAAAATATTACATAAAGGGTCCTAAAAAAGGAAGAATAGGAGAATTTTGTCGTGACCTACCTGGCATGCCAGATAATATTCATTATGTTGGACAAGGGCAATATTATATTGCAATGGCCACGTCCTTAACTCCTCAATGGGATTTATTACGTAGATACCCTTTTATTCGAAAAGTTGCAGCAATGGTTACAAAGCATGTAGGAAGACTACATGTGGAGGATAATGGAGGAGTCCTTGTTGTGAATTTGGAAGGAAAACCAACTGCACACTATTATGATACTGAATTATCATTAATCTCGAGTGGGATCAAAATTGAAAATTATATATATTGTGGTTCCCTTATGTATCCCTACTTAATACGTCTTGATTTGAAGTAA 993 0.4159 MIATVAILYGLGPLKAVQLRWPVKSEIVAQGEVVGPEDLAYDKRRRVIYTGCEDGWIKRVTVADSVADTVVENWVNTGGRPLGLALEKSGELMVADAVKGLLRVTRKKKVEVLADEVEGLKFNLTDGVDVAEDGTIYFTDATYKYSLEDYYNDIIEGRPHGRFMNYNPETKNVTVLARNLYFPNGVVVSSDQHFVIYCETIKKRCRKYYIKGPKKGRIGEFCRDLPGMPDNIHYVGQGQYYIAMATSLTPQWDLLRRYPFIRKVAAMVTKHVGRLHVEDNGGVLVVNLEGKPTAHYYDTELSLISSGIKIENYIYCGSLMYPYLIRLDLK 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g00914 330 Gene3D - 18 327 IPR011042 -
Cca11g00914 330 Pfam Strictosidine synthase-like, N-terminal 25 60 - -
Cca11g00914 330 PANTHER STRICTOSIDINE SYNTHASE-RELATED 23 325 - -
Cca11g00914 330 Pfam Strictosidine synthase 126 213 IPR018119 GO:0009058|GO:0016844
Cca11g00914 330 PANTHER PROTEIN STRICTOSIDINE SYNTHASE-LIKE 4-RELATED 23 325 - -
Cca11g00914 330 SUPERFAMILY Calcium-dependent phosphotriesterase 18 329 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g00914 Cca-Chr11 18849586 18858249 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g00914 - - gsj:114381080 575.859
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca11g00914 11 18849586 18858249 Cca11g00914 11 18849586 18858249 ECH