Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g00823 ATGGCAACTTGGCCATGGCTTCAACTCTTCATGTATTTCTTAGCATTGATATGGACACCTGGAAGCTGTTCGCATGGTCATTCAATTCCAAGTCAGGTGGTGGATTCTCCAAATGACAACAAATTTCTAATGCAGTCATATTATGACCGATATATGGACTTGGATGATTCAGATTTTGAAAATTTTATGTCTCAACAAGACACTTCTGGTGTGTGTGAAGTGTTTCCAGATAGCCATAATTTCCCCTTGAGATTGTCTGATCTAAAGCGCAATCTTAATGGAGAAGGTTCCCACCGAAGTGTGTCTACATTAATCAAATTTCAAAGTCAACAGTCTATATTTTCGTCTGAACTGTTAAGCAACTCATGTGAATTTATAATTATTGAAAGACTGCCTTCTGGAGTTTTTGCTGATCCATTTGAATTACAACGTCTTGTTCAGCGTGGTGTGTTCAGTGAGATAGCTGTCTTTGGTGATACAAATCTGGAGCTGCCTTCATTCTTGTCCAATCATTCTGTTGTTGAAATTCACTTAGTTGTTGACCCAAATATATTGCAAGAGGCAACTGATATCGATATACAGCTTCCATTGCATGCTCGATATCAACCTCTGAATGAAAGTGGCTACTCTACAGTTGAATTTGGTGCACCAGATATATTAGTGTGCTGCAGAAAAAAGGAAAAGGTAGCAAACCGGTATTGCTTCTTCAAATTGAAAAATAATGATGCTAATGTGTATGGTGCTCGTATTGTTTGGAAAATACCTTCTGGAATAAAGGCGCATGTTGATTTTGTTTCTGCAGTTACATTTATTGCGGCCTTGTTATCAACTTTTGTAATTGTTGTTGCATCATTATATTATTCCAATAGCAGAATCAGTAAAGATTTAAAACAATTGTAA 900 0.3689 MATWPWLQLFMYFLALIWTPGSCSHGHSIPSQVVDSPNDNKFLMQSYYDRYMDLDDSDFENFMSQQDTSGVCEVFPDSHNFPLRLSDLKRNLNGEGSHRSVSTLIKFQSQQSIFSSELLSNSCEFIIIERLPSGVFADPFELQRLVQRGVFSEIAVFGDTNLELPSFLSNHSVVEIHLVVDPNILQEATDIDIQLPLHARYQPLNESGYSTVEFGAPDILVCCRKKEKVANRYCFFKLKNNDANVYGARIVWKIPSGIKAHVDFVSAVTFIAALLSTFVIVVASLYYSNSRISKDLKQL 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g00823 299 Pfam PIG-X / PBN1 96 283 IPR013233 GO:0005789|GO:0006506
Cca11g00823 299 PANTHER PHOSPHATIDYLINOSITOL-GLYCAN BIOSYNTHESIS CLASS X PROTEIN 34 298 IPR040039 GO:0006506
Cca11g00823 299 SMART pig_x_1 93 288 IPR013233 GO:0005789|GO:0006506
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g00823 K07541 - gmx:100792914 375.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca11g00823 11 15836038 15838469 Cca11g00823 11 15836038 15838469 ECH