Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g00792 ATGGACAAACCGCAGGGCTCAAGCGCAGAGCAGGATCCCAACGACCCGCACCCGACCCGACACGAGGCCGATCTCCCATCCGGGCTAACCCGGGAAGAGATGGAGGACCTCAAGGCCTCCGTGGTCGACCACCACACCTACACGGTGGGGCCGCGCCAATGCTCCTCCCTCCTGGCGCAGCGAATCCACGCGCCGCCGCACGCCGTCTGGGCCGTGGTGCGCTGCTTCGACACCCCGCAGGCCTACAAGCACTTCATCAGGAGCTGCCACGTCAACGAGGGCTTCCAGCTGGTCGTGGGCTGCACCCGCGACGTCACCGTCATCTCCGGGCTACCGGCTGCCACCAGCACCGAGCGCCTCGACCTCCTCGACGATGACCGACACGTCATCGGCTTCACCATCGTCGGGGGCGACCACCGCCTCCGCAACTACCGCTCCGTCACCTCCGTCCACGGCTTCGACCGCGACGGCAAGATCTGGACCGTTGTTCTCGAATCCTACGTTGTCGATGTCCCCGAGGGGAACACCGAGGAGGACACGCGTCTCTTCGCCGACACCGTTGTCAAGCTTAATCTCCAGAAGCTCGCGTCTGTCACCGAAGGAACCAACGGCCACGGTGACTCTAGCCTCTAG 633 0.6524 MDKPQGSSAEQDPNDPHPTRHEADLPSGLTREEMEDLKASVVDHHTYTVGPRQCSSLLAQRIHAPPHAVWAVVRCFDTPQAYKHFIRSCHVNEGFQLVVGCTRDVTVISGLPAATSTERLDLLDDDRHVIGFTIVGGDHRLRNYRSVTSVHGFDRDGKIWTVVLESYVVDVPEGNTEEDTRLFADTVVKLNLQKLASVTEGTNGHGDSSL 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g00792 210 MobiDBLite consensus disorder prediction 14 29 - -
Cca11g00792 210 CDD PYR_PYL_RCAR_like 54 200 - -
Cca11g00792 210 PANTHER ABSCISIC ACID RECEPTOR PYL1 24 202 - -
Cca11g00792 210 Gene3D - 13 209 IPR023393 -
Cca11g00792 210 PANTHER - 24 202 - -
Cca11g00792 210 Pfam Polyketide cyclase / dehydrase and lipid transport 60 199 IPR019587 -
Cca11g00792 210 MobiDBLite consensus disorder prediction 1 29 - -
Cca11g00792 210 SUPERFAMILY Bet v1-like 54 198 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g00792 Cca-Chr11 14907385 14908537 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g00792 K14496 - gmx:100786749 349.747
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca11g00792 11 14907385 14908537 Cca11g00792 11 14907385 14908537 ECH