Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g00726 ATGAAGTTTATGAAACTGGGATCTCGTCCAGATACCTTTTACACTGCAGAGTCTGTAAGGACAATCTCTTCTGAAGTTTCAAGTGACCTCATAATTCAAGTGAAAGGAACTAGATATCTTCTTCATAAGTTTCCCCTGCTGTCAAAATGTTTGCGCCTGCAAAGACTGTGCTCAGAGAGTTATGAATCTTCTGATTCTCCTCAGCACCAAATAGTTCAACTCCCTGATTTTCCTGGTGGGGTGGAAGCATTTGAGCTATGTGCCAAGTTCTGCTATGGCATAACCATCACTCTCAGTGCTTACAACATTGCAACTTCGCGGTGCGCTGCGGAGTACTTGCAAATGACTGAGGATGTTGAGAAGGGAAATTTGATCTACAAGCTTGAGGTTTTCTTGAATTCTTGCATCCTCAATGGATGGAAGGATTCCATTGTTACTCTTCAAACCACCAAAGCATTGCCTTTGTGGTCGGAGGAATTGGCCATTACCAGCAGATGCATTGAGGCCATTGCCTCAAAGGTCTTGAGCCACCCCTCTAAGGTGAGTTTGTCACATAGCCATTCCCGGAGGGTAAGGGATGATGTGTCCTCTTGGAATGGAACAGAAAGTCTGAGACACAAATCAACAAGTAAGGGATGGTGGGCTGAGGATTTAGCAGATTTGAGCATAGACTTGTATTGGAGAACCATGATTGCTATCAAATCTGGTGGTAAGACACCCTCAAATCTCATTGGTGATGCACTGAAAATATATGCATCTAGATGGCTACCAAACATAAGGAAGAATGTGATTGTCAAGAGGGAAAGTGAATCGGACTCGGATTCAGATTCAGCTAGTGAGTTGACTTCAAAGCATAGACTGCTTTTGGAGTCAATAGTGAGCTTGCTTCCAGCAGAGAAAGGTGCTGTTTCTTGCAGCTTCCTTCTTAAACTCTTGAAGGCAGCGAATATTCTCAATGCTTCTGCTTCTTCAAAGGTGGAATTGGCCACAAGGGTAGGACTTCAGTTGGAGGAAGCCACGGTTAATGATCTTTTAATACGCTCAGTGTCCAACACAAATGATATGGTGTATGACGTAGACTTGGTGATGATCATATTGGAACAATTTATGTTGCAAGGTCAGAGTCCACCAACAAGCCCTCCAAGATCAAGGTTGACCATTGAAAGGAGGAGGTCTCGTTCTGCAGAGAATATTAACTTCGAGTTCCAAGAGAGTAGAAGGTCCTCCTCAGCTTCTCATAGCTCAAAGCTGAAGGTGGCTAAGCTTGTGGATAGGTACCTTCAGGAGGTTGCCAGGGATGCGAATTTGCCTCTCTCAAAATTCATTGCCCTTGCTGAAACTATACCAGAATTTGCTAGACTTGACCATGATGACCTATACAGAGCTATTGACATTTATCTCAAGGCACATCCAGAACTCAATAAGAGTGAAAGGAAGAGACTGTGTCGAATTCTAGACTGCAAAAAGCTGTCTATGGAAGCTTGCATGCATGCAGCACAGAACGAGCTCCTTCCCCTAAGGGTGGTTGTCCAAGTTCTCTTCTTTGAGCAAGCACGAGCAGCAGCATCTGGTGGAAAAGTGAGTGACATGCCAAGCAACCTCAAGGCGTTACTCACTGCTCATGGCATTGACCCATCAAAACACAAAGCACCATTGAGCACCACAACAAGTATACATGCTGATGACAATTGGAGTGTTTCTGGATTTAAGACACCAAAGTCAACTAGGAATCCAACTCTCAGGATGAAGCTAGCTGAGGATGACCTGGATGAAAATGTGGTACCCCGTGATGAAATTGGAAGAACTTCTAGATTTAAGGGTCTTCTTGCTTTTCCCACTCAACCCAAACGAATGTTCAGCAAGTTGTGGGCTACCAACAAAAGTGCCACTGAAAAGAATTGA 1902 0.4406 MKFMKLGSRPDTFYTAESVRTISSEVSSDLIIQVKGTRYLLHKFPLLSKCLRLQRLCSESYESSDSPQHQIVQLPDFPGGVEAFELCAKFCYGITITLSAYNIATSRCAAEYLQMTEDVEKGNLIYKLEVFLNSCILNGWKDSIVTLQTTKALPLWSEELAITSRCIEAIASKVLSHPSKVSLSHSHSRRVRDDVSSWNGTESLRHKSTSKGWWAEDLADLSIDLYWRTMIAIKSGGKTPSNLIGDALKIYASRWLPNIRKNVIVKRESESDSDSDSASELTSKHRLLLESIVSLLPAEKGAVSCSFLLKLLKAANILNASASSKVELATRVGLQLEEATVNDLLIRSVSNTNDMVYDVDLVMIILEQFMLQGQSPPTSPPRSRLTIERRRSRSAENINFEFQESRRSSSASHSSKLKVAKLVDRYLQEVARDANLPLSKFIALAETIPEFARLDHDDLYRAIDIYLKAHPELNKSERKRLCRILDCKKLSMEACMHAAQNELLPLRVVVQVLFFEQARAAASGGKVSDMPSNLKALLTAHGIDPSKHKAPLSTTTSIHADDNWSVSGFKTPKSTRNPTLRMKLAEDDLDENVVPRDEIGRTSRFKGLLAFPTQPKRMFSKLWATNKSATEKN 633
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g00726 633 Gene3D Potassium Channel Kv1.1; Chain A 15 123 IPR011333 -
Cca11g00726 633 PANTHER PHOTOTROPIC-RESPONSIVE NPH3 FAMILY PROTEIN 1 631 - -
Cca11g00726 633 PANTHER OS12G0117600 PROTEIN 1 631 IPR043454 -
Cca11g00726 633 Pfam NPH3 family 213 495 IPR027356 -
Cca11g00726 633 ProSiteProfiles NPH3 domain profile. 212 519 IPR027356 -
Cca11g00726 633 SUPERFAMILY POZ domain 22 119 IPR011333 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g00726 Cca-Chr11 12584319 12587734 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca11g00726 26 543 EF-hand Containing Proteins AT3G44820 35.424 9.37e-95 303
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g00726 - - gmx:100792829 1041.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca11g00726 11 12584319 12587734 Cca11g00726 11 12584319 12587734 ECH