Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g00690 ATGGGATCTGAAGAGCCAAAGGCCATTACTATTCATGTAACAGGATTTAAAAAGTTTCAAGGGGTTTCGGAAAACCCTACAGAAACCATTGTTAATAATCTGAAGGATTATGTTGAAAGGAGAGGCCTCCCTGCTGGTGTTACTCTTGGGAGTTGCACTGTGCTTGAAGTGGCTGGGGAAGCTGCACTTCCTCAGCTATGTCAAACCATGGAATCTGCTGTCTCCAAGACAGATACTGTGAGCAATGCAAATGTTGTATGGCTTCACTTGGGGGTGAATAGTGGAGTTGTAAGGTTTTCCATTGAGCAACAGGCAGTAAATGAAGCCACTTTCCTCTGTCCAGATGAGTTAGGATGGCAACCACTGCAAGTCCCAATAGCCCATGAGGATGGAGGAATTTCTCGAGCAAGACAGACTTGTTTGCCGGTTGATGCAATCTTGAAATCCTTGAAGAAGGGAGGTTATGATGTGATGATATCAGGTGATGCAGGACGCTTTGTGTGCAATTATGTGTATTACAACTCCCTCCGATTTGCAGAACAAAATGGTAACAAGTCTCTATTTGTTCATGTTCCCCTATTTTCAAGCATTAATGAAGAAACCCAGATGCGATTCACAGCCTCTCTTTTGGAGGCCATTGCTTCTGCATCTTAA 654 0.4373 MGSEEPKAITIHVTGFKKFQGVSENPTETIVNNLKDYVERRGLPAGVTLGSCTVLEVAGEAALPQLCQTMESAVSKTDTVSNANVVWLHLGVNSGVVRFSIEQQAVNEATFLCPDELGWQPLQVPIAHEDGGISRARQTCLPVDAILKSLKKGGYDVMISGDAGRFVCNYVYYNSLRFAEQNGNKSLFVHVPLFSSINEETQMRFTASLLEAIASAS 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g00690 217 PIRSF Pyrrolidone-crbxlat_pptds 8 217 IPR000816 GO:0005829|GO:0006508|GO:0016920
Cca11g00690 217 CDD Peptidase_C15 9 215 IPR000816 GO:0005829|GO:0006508|GO:0016920
Cca11g00690 217 PANTHER BNAA09G15240D PROTEIN 1 215 - -
Cca11g00690 217 PANTHER PROTEASE FAMILY C15 PYROGLUTAMYL-PEPTIDASE I-RELATED 1 215 IPR016125 -
Cca11g00690 217 Gene3D - 8 216 IPR036440 -
Cca11g00690 217 SUPERFAMILY Pyrrolidone carboxyl peptidase (pyroglutamate aminopeptidase) 9 214 IPR036440 -
Cca11g00690 217 Pfam Pyroglutamyl peptidase 11 196 IPR016125 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g00690 Cca-Chr11 11577374 11580361 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g00690 K01304 - gmx:100784344 367.081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca11g00690 11 11577374 11580361 Cca11g00690 11 11577374 11580361 ECH