Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g00687 ATGGCAGAGAGCAAGGACCTCCAAACCGCACTCAGAAGGCTCGCATCTGTAACCAACCACCTCACCACTCCCACTCCTGCTTCCGCCGGCGAACTTTCCCTCCGCCGCACCTCCGCCCGCAGCGACACCTTCCACCGCGTCCACGGCGATGTTCCCTCCCACGACGTGGTTTGGAGGAGCGCTTCCGACGAGTTCACCGACATTGTGTACGAGAAAGCCCTCGGGGAAGGAATAGCCAAGATCAGCATTAATAGGCCTGAGAGAAGGAACGCGTTCCGACCGCACACCGTTAAGGAGCTTATGCGTGCTTTCACTGACGCCAGGGAAGATACTTCTATTGGTGTCATCATTCTCACCGGAAAGGGAACCAAGGCATTTTGTAGTGGTGGTGACCAGGCTTTGAGGACTGAAGATGGCTATTCTGATCATGGAAATTTTAGTAACCTTAATGTGTTAGACTTGCAGGTGCAGATACGCCGTCTTCCTAAACCAGTGATTGCAATGGTAGCAGGTTATGCTGTTGGAGGAGGGCATGTATTACATATGGTCTGTGATCTAACTATTGCAGCAGACAATGCTATCTTTGGCCAAACTGGTCCCAAGGTAGGAAGCTTTGATGCTGGTTATGGAAGTTCTATCATGTCCCGTTTGGTAGGTCCAAAAAAAGCACGTGAAATGTGGTTTCTCACAAGGTTCTATGATGCTGTTGAAGCAGAGAAAATGGGCCTTGTCAACACTGTTGTACCGCTTGAGAATTTGGAGAAAGAAACGATAAAATGGTGTCGGGAGATACTGAGGAACAGTCCAACTGCTATTCGGGTGCTCAAGTCAGCTCTTAATGCAGTAGATGATGGACATTCTGGGCTTCAGGAAATTGGTGGAAATGCTACGCTAATATTCTACGGCACCGAGGAAGCTAAAGAGGGGAAGACTTCATATATGCAACGTAGACGCCCTGATTTTTCTAAGTTCAATCGGCGACCTTAA 987 0.4914 MAESKDLQTALRRLASVTNHLTTPTPASAGELSLRRTSARSDTFHRVHGDVPSHDVVWRSASDEFTDIVYEKALGEGIAKISINRPERRNAFRPHTVKELMRAFTDAREDTSIGVIILTGKGTKAFCSGGDQALRTEDGYSDHGNFSNLNVLDLQVQIRRLPKPVIAMVAGYAVGGGHVLHMVCDLTIAADNAIFGQTGPKVGSFDAGYGSSIMSRLVGPKKAREMWFLTRFYDAVEAEKMGLVNTVVPLENLEKETIKWCREILRNSPTAIRVLKSALNAVDDGHSGLQEIGGNATLIFYGTEEAKEGKTSYMQRRRPDFSKFNRRP 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g00687 328 CDD crotonase-like 68 264 - -
Cca11g00687 328 Gene3D - 266 316 IPR014748 -
Cca11g00687 328 ProSitePatterns Enoyl-CoA hydratase/isomerase signature. 166 186 IPR018376 GO:0003824
Cca11g00687 328 Gene3D - 49 265 - -
Cca11g00687 328 PANTHER NUCLEOSIDE-DIPHOSPHATE-SUGAR EPIMERASE 8 328 IPR010198 GO:0008935|GO:0009234
Cca11g00687 328 SUPERFAMILY ClpP/crotonase 58 323 IPR029045 -
Cca11g00687 328 Pfam Enoyl-CoA hydratase/isomerase 76 322 IPR001753 GO:0003824
Cca11g00687 328 Hamap 1,4-dihydroxy-2-naphthoyl-CoA synthase [menB]. 58 327 IPR010198 GO:0008935|GO:0009234
Cca11g00687 328 TIGRFAM menB: naphthoate synthase 65 324 IPR010198 GO:0008935|GO:0009234
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca11g00687 1 328 Acyl Lipid Metabolism Gene Families AT1G60550 76.855 0.0 540
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g00687 K01661 - gmx:100782743 575.089
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca11g00687 11 11530602 11534334 Cca11g00687 11 11530602 11534334 ECH