Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g00686 ATGGATCTCAAAAAGGCACAAACTGATCCAATTTTGGATCCTAACCAATCAAATTATGTCTATCATCTCGCTTTGGATATTGGAGGATCCCTAGCCAAAGTAGTTTACTTCACTAAAGATGATGATCATTTTGTTGATGGTGAGGAGGGGTTATCTCATAGAAAGGCTTTGGAGAAATCCAATGGCAGTAGGCAATATCCTGTTCTTAATGGGAGGCTCAATTTTAAGAAGTTTGAAACAAGCAAGATAAATGATTGCGTAGAATTTATCAAGTCCATGAAACTTCATTTTGGAGGTAGTCAGCGACAAGCAATTCCTGGAAGTCAGCCGATAGCTGTTAAGGCCACAGGTGGTGGTGCGTACAAATATGCAGACCTCTTCAAGGAAAGACTAGGAATCATTCTTGACAAGGAAGATGAAATGGACTGTCTTGTTGCAGGAGCAAATTTTCTTCTCGAGGTGGTCCACCAGGAAGCATTTACCTATATGGGTGATCAAAAGCAATTTGTACAGATTGACCAGAATGATCTGTATCCCTATCTTCTTGTTAATATTGGGTCTGGTGTTGGCATGATTAAGGTGGAAGGAGAGGGAAAGTTTGAGCGAGTTAGTGGAACAAGTATAGGTGGAGGCACTTTCTGGGGTTTAGGAAAGCTTTTAACCGATTGCAAGAGTTTTGATGAGTTGCTGGACTTAAGTTATCGGGGTAACAACAGAGCCGTAGATATGCTTGTTGGAGATATTTATGGTGGAATGGACTATTCAAAGATAGGTCTTTCATCCACTGCAATAGCCTCTAGTTTTGGAAAGGCAATTTCTGATAATAGGGAGCGTGAAGATTACAAACCTGAAGATATTGCTCGATCTCTTCTAAGAATGATCTCAAATAATATTGGACAGATTTCTTACTTAAATGCCCTTCGCTTTGGGCTGAAGAGGATTTTTTTTGGTGGATTTTTTATTCGGAGGCATCCTTTTACAATGGACACATTATCTGTTGCTGTTAATTTCTGGTAA 1017 0.3972 MDLKKAQTDPILDPNQSNYVYHLALDIGGSLAKVVYFTKDDDHFVDGEEGLSHRKALEKSNGSRQYPVLNGRLNFKKFETSKINDCVEFIKSMKLHFGGSQRQAIPGSQPIAVKATGGGAYKYADLFKERLGIILDKEDEMDCLVAGANFLLEVVHQEAFTYMGDQKQFVQIDQNDLYPYLLVNIGSGVGMIKVEGEGKFERVSGTSIGGGTFWGLGKLLTDCKSFDELLDLSYRGNNRAVDMLVGDIYGGMDYSKIGLSSTAIASSFGKAISDNREREDYKPEDIARSLLRMISNNIGQISYLNALRFGLKRIFFGGFFIRRHPFTMDTLSVAVNFW 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g00686 338 PANTHER PANTOTHENATE KINASE 2 338 IPR004567 GO:0004594|GO:0005524|GO:0015937
Cca11g00686 338 Gene3D - 24 158 - -
Cca11g00686 338 SUPERFAMILY Actin-like ATPase domain 21 157 IPR043129 -
Cca11g00686 338 TIGRFAM panK_eukar: pantothenate kinase 22 338 IPR004567 GO:0004594|GO:0005524|GO:0015937
Cca11g00686 338 Gene3D - 159 338 - -
Cca11g00686 338 PANTHER PANTOTHENATE KINASE 2 338 - -
Cca11g00686 338 Pfam Fumble 22 338 IPR004567 GO:0004594|GO:0005524|GO:0015937
Cca11g00686 338 SUPERFAMILY Actin-like ATPase domain 130 338 IPR043129 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g00686 Cca-Chr11 11484103 11497568 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g00686 K09680 - gmx:100782208 624.009
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca11g00686 11 11484103 11497568 Cca11g00686 11 11484103 11497568 ECH