Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g00647 ATGAAGGATTTGAATTCGGATCTGTTTGACCCGGTCATCAAGATGGAGTCCGAGTGGTCTCGCGGCGGTTCCACCTCCGACGCCGACTTCGCCTTCGCCTTCAACGACAGTAACTTCTCCGACAGGCTTCTCCGGATCGAGATCATGTCCGACCCCGTCGACGCCCCACGCGATTCCGACACCTGCGCCACCATTGCCGACTGGGCTCGCCACCGCAAGCGCCGCCGCGAGGATATCAAAAGGGACACCGGTGCGGATCTTGCTTCGGTGCCAGACGAGCAAATTTTGAAAGAGAAACAGCCTGATGTGGATGAGTGTGAAAATCAAGATGAAGAGGCTGTTGCGATGGTTGAAGAACCCCATTCTGGTGATGAAGCTACAAATAGTAATGATTCGGACTGGAGCATGGACTGCTCTTCAGGTGCAGTTGTTAGAGTTAAAACGCTGCATATCAGTTCGCCTATCTTGGCTGCTAAAAGTCCTTTCTTCTATAAGCTTTTCTCAAATGGGATGAGGGAGTCTGAGCAGAGACATGTCACCCTCAGAATTAATGCCTCTGAGGAAGCTGCTCTCATGGAGCTACTGAATTTTATGTACAGCAATACCTTGAGCACTACTACAGCACCAGCTTTACTGGATGTGTTGATGGCTGCTGATAAATTTGAAGTTGCTTCATGCATGAGACACTGCAGCAGGTTATTGCGGAATATGCCAATGACGCCTGACTCTGCATTGCTTTATCTGGAGCTTCCTTCTAGTGTCTTAATGGCTGATGCAGTCCAACCATTGACTGATGCTGCAAAGCAGTATCTGGCTGGTCGATACAAGGATATAACTAAATTCCAGGAAGAGGTCATGGCCTTGCCCCTAGCTGGAGTAGAGGCAATATTGTCTAGCGACGATCTCCAGGTTGCATCTGAAGATGCTGTATATGACTTTGTGTTGAAGTGGTCTCGACAGCAGTACCCCAAACTGGAAGAAAGGCGAGAAGTCCTGGGTGCACGGCTTGCACGATTAATTCGTTTCCCTTACATGACCTGCCGGAAGCTTAAGAAGGTCTTGACCTGCTCTGACTTTGACCATGATGTTGCATCCAAGCTTGTACTCGAGGGCCTATTTTTCAAAGCAGAGGCTCCACATCGGCAACGATCACTGGCAGCAGAAGACTCTGCTTCTTCATACCGTCGCTTTGTGGAGAGGGCGTACAAGTACCGGCCCGTTAAGGTGGTAGAATTTGAACTTCCTCGGCAGCAATGTGTGGTGTACTTGGATCTGAAGAGGGAGGAGTGTGCCAACTTGTTCCCATGTGGCCGGGTTTATTCTCAGGCATTCCACTTGGGTGGACAAGGTTTTTTTCTATCAGCACATTGCAACATGGACCAACAGAGCTCTTTCCATTGCTTTGGGCTGTTTTTGGGAATGCAGGAAAAGGGCTCAGTAAGCTTTGCCGTTGACTATGAGTTTGCTGCAAGGTCTAGGCCAACAGAGGAATTTGTTAGCAAGTACAAAGGGAACTATGTGTTCACAGGGGGAAAGGCCGTTGGATATAGAAACTTGTTTGCTATTCCATGGACTTCGTTCACGGCTGAGGATAGTCTTTACTTCATCAATGGTGTCCTCCACCTTAGAGCTGAACTCACCATCAGGCACTGA 1653 0.4906 MKDLNSDLFDPVIKMESEWSRGGSTSDADFAFAFNDSNFSDRLLRIEIMSDPVDAPRDSDTCATIADWARHRKRRREDIKRDTGADLASVPDEQILKEKQPDVDECENQDEEAVAMVEEPHSGDEATNSNDSDWSMDCSSGAVVRVKTLHISSPILAAKSPFFYKLFSNGMRESEQRHVTLRINASEEAALMELLNFMYSNTLSTTTAPALLDVLMAADKFEVASCMRHCSRLLRNMPMTPDSALLYLELPSSVLMADAVQPLTDAAKQYLAGRYKDITKFQEEVMALPLAGVEAILSSDDLQVASEDAVYDFVLKWSRQQYPKLEERREVLGARLARLIRFPYMTCRKLKKVLTCSDFDHDVASKLVLEGLFFKAEAPHRQRSLAAEDSASSYRRFVERAYKYRPVKVVEFELPRQQCVVYLDLKREECANLFPCGRVYSQAFHLGGQGFFLSAHCNMDQQSSFHCFGLFLGMQEKGSVSFAVDYEFAARSRPTEEFVSKYKGNYVFTGGKAVGYRNLFAIPWTSFTAEDSLYFINGVLHLRAELTIRH 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g00647 550 Gene3D Potassium Channel Kv1.1; Chain A 127 258 IPR011333 -
Cca11g00647 550 PANTHER OS02G0260700 PROTEIN 6 550 IPR045890 -
Cca11g00647 550 SUPERFAMILY TRAF domain-like 437 548 - -
Cca11g00647 550 MobiDBLite consensus disorder prediction 73 92 - -
Cca11g00647 550 Pfam BTB/POZ domain 147 236 IPR000210 GO:0005515
Cca11g00647 550 CDD BTB_POZ_ZBTB_KLHL-like 143 221 - -
Cca11g00647 550 Pfam BTB And C-terminal Kelch 261 353 IPR011705 -
Cca11g00647 550 ProSiteProfiles BTB domain profile. 138 207 IPR000210 GO:0005515
Cca11g00647 550 SMART BACK_2 253 355 IPR011705 -
Cca11g00647 550 SMART BTB_4 111 238 IPR000210 GO:0005515
Cca11g00647 550 SUPERFAMILY POZ domain 147 235 IPR011333 -
Cca11g00647 550 PANTHER BTB/POZ DOMAIN-CONTAINING PROTEIN POB1 6 550 - -
Cca11g00647 550 Gene3D - 270 375 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g00647 Cca-Chr11 10547631 10551225 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g00647 - - gmx:100776595 1013.83
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca11g00647 11 10547631 10551225 Cca11g00647 11 10547631 10551225 ECH